Oncorhynchus keta (chum salmon): 118375530
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Entry
118375530 CDS
T09424
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118375530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118375530
03036 Chromosome and associated proteins [BR:
oke03036
]
118375530
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118375530
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118375530
PBAF complex
118375530
GBAF(ncBAF) complex
118375530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
118375530
NCBI-ProteinID:
XP_052330029
LinkDB
All DBs
Position
21:48193258..48234932
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AA seq
526 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGGMGPGPQVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGP
GYPTLTPPSLSLLSPLQRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPGVMDPSRKR
PAPQQVQQQRNQHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQ
EALKRPIKQKRKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQ
KRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLD
YQPPQFKLDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFET
QRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLL
STASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDV
VANPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcggctccaacgggaggaggtggtggcgggggaatg
ggacctggaccccaggtgcaaggtggaggaccaggcatgggacctggaactcctggtgga
aggatgggaccctcatcgggcgcacagaaccacctttaccgatctccgatgcctgggcct
ggatacccgactctaacccctccctccctgtctcttctctcccccctccagagaccaggt
gggatgccaccctccagccgtatgacaccccagggtccgcccatggggcctccaggctac
ggctccagccccgtgtcccgaccagggatgcctggcgtcatggatccctcccgtaagagg
cctgcccctcagcaggtccagcaacagcgcaaccaacataccaagaagaagaaaatggcg
gataagattttacctcagaggatccgggagctggtgccagagtctcaggcctacatggac
ctgctggcgtttgagaggaagctggatcagaccatcatgaggaaacgtctggacatccag
gaggcactcaagagacccattaagcaaaagcgaaagcttcgtatcttcatatccaacacc
ttcaaccctgccaagcccgacgcagaagacggagagggcactgttgcgtcatgggagctg
cgtgtcgaagggcgtctgcttgaagatactgctgtgtccaaatatgaagccaccaagcag
aagagaaagttctcttccttcttcaagtctctggtcatcgagttggacaaggacctctat
gggcctgacaatcacttggtcgagtggcacaggactgcgaccactcaggagacagacggg
ttccaggtgaagaggccaggggatgtgggcgtacgctgcactgtcctgctcatgctggac
taccagccccctcagttcaagctggaccctcgcctggcccgtatgttggggatccacacc
cagaccaggccggtcatcatccaggcactctggcagtatgttaagacccacaagctgcag
gacccccacgagagagagttcatcaactgtgacaagtacctgcagcagatctttgagacc
cagcgtatgaagttctctgagatcccacaacgcctacatgctctcctgatgcctccagaa
cctatcatcattaaccatgtcatcagtgtggatcccaatgaccagaagaagacggcctgc
tatgacatcgatgtggaggtggacgacactttaaagacccagatgaactccttcctccta
tccaccgccagccagcaggagatagctggcctggacaacaagatccatgagaccatagag
acgatcaaccagctgaagacccagagagagttcatgttgagcttcgccagagacccccag
ggcttcatcaacgactggctgcaatcgcagtgcagggatctcaagactatgactgatgtg
gttgcgaacccagaagaggagaggagagcagagttctacttccaaccctgggcccaggag
gccgtgtgtcgttacttctactccaaggtccagcagaggaggcaggagctggaacaagcc
ctgggaatcagaaacacttag
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integrated database retrieval system
