Oncorhynchus keta (chum salmon): 118375566
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Entry
118375566 CDS
T09424
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118375566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118375566
03012 Translation factors [BR:
oke03012
]
118375566
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118375566
Translation factors [BR:
oke03012
]
Eukaryotic type
Release factors
118375566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
118375566
NCBI-ProteinID:
XP_035618032
LinkDB
All DBs
Position
30:complement(31897444..31905836)
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AA seq
443 aa
AA seq
DB search
MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVANDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESVGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKTFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDDCFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaccctaacgcggcagaccggaacgtggagatatggaaaatcaagaaactg
attaaaagtttggaagctgcccgtggtaatggaaccagtatgatctcgctgatcatcccc
cctaaggaccagatctccagagtggccaagatgttggcagatgagtttggcacagcctct
aacatcaagagcagagtcaacaggctctctgtgctcggggccatcacctctgtacagcag
agactaaagctatacaacaaggtgccgcctaatggcctggtggtgtactgtggaaccatc
gtgacagacgagggcaaagagaagaaagtcaacattgactttgagccttttaaacccatc
aacacctccctgtacctctgtgacaacaagttccacactgaggcgttgacagccctgctg
tctgatgacagtaagtttggcttcatagtgatagatggtagtggggctctattcgggacg
ctccaggggaacactagagaggtcctgcacaagttcactgtggacttgcccaagaaacac
ggcagaggaggtcagtctgctttgcgctttgcccgtctgaggatggagaagagacacaac
tatgtgaggaaggtggctgagacagctgtccagctctatgtggctaacgacaaggtcaac
gtggccggaatggtcctagcagggtctgccgacttcaagactgagctcagccagtccgac
atgttcgaccctaggttacaggcaaagattctaaagctggtggacatctcgtacggaggg
gagaacggtttcaaccaggccatcgagctgtcggcagaggtcctctctaacgtcaagttc
atccaggaaaagaagctcataggccggtactttgatgagatcagtcaggacacggggaag
tactgttttggggtggaggacacactcaaagccctggagatgggggctgtggagatcctc
atcgtttatgagaacctagacactatgcgctatatccttcgcctgcacggggctgagagc
gtcggaacagaaaacgatgagaagactctttatttaacaccagagcaggagaaggacaag
tcccacttcacagacaaggagactgggcaggaccacgagttgattgaaagcatgcctctg
ctggagtggtttgccaacaactacaagacgtttggagccacgctggagatcgtcacagac
aagagtcaggaagggtctcagtttgtcaagggcttcggtggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcggaggacgatgactgttttgattta
gatgactactag
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