Oncorhynchus keta (chum salmon): 118375573
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Entry
118375573 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04217
Necroptosis
oke04622
RIG-I-like receptor signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118375573
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118375573
04625 C-type lectin receptor signaling pathway
118375573
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118375573
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118375573
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118375573
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C67
118375573
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118375573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118375573
NCBI-ProteinID:
XP_052340683
LinkDB
All DBs
Position
2:78709986..78744486
Genome browser
AA seq
962 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSIRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVTLVEEEMDFHQLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVD
HPVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNEATPPTRAPPSASLSNDNKFHSLPFSLS
RKTGPNGSMSHGPLSLSVQSVMGEQMQMPEPPSPTPPSPQPPSPPSSRGGGGVPGLEVGS
LVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFV
KLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGI
QGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYV
CATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYF
YQIFMDKKDKVGVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLE
LDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHR
HGKLSVPKELQEGVWRQGSFPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSMADR
DGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSL
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtggcggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccctgaggatc
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctgccc
cccagcaagggcaagaggagcatacgcatcctggaccagaccaacgtggtgctgagcctg
gatgagcgggatgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagagac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaggatgagtgcggagtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcaccctggtggag
gaggagatggatttccatcagctggagatcaactccagggtccttgtccagaccagagag
gggccggagagaggaaccataatcttctgtgacctgctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgacgta
atgccagagtactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagcaaaccaaagagcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagagttgtattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaaagcacatggtacattgatgaagtaggggaagaccct
gccaagtccctcacagacacgccccctgacttcaatgaagccacacctcctaccagggcc
ccgccctctgcttccttgtccaatgacaacaagttccattccctgcccttcagcctgagc
cgtaagacggggcccaatggcagcatgagccatggacccctctccctttccgtgcagtca
gtgatgggagagcagatgcagatgccagagcccccatcccctacccctccctctccgcag
cccccctcacctcccagctctcgcgggggtgggggagtgcctggtctggaggtggggtcc
ctggtggaggtgaaggagaacccgcccctgtgtggggtcatccgctgggtgggcctgccc
ccgggactaccagagccactggctggcctggagctggaggaagagtgtgttggctgtaca
gacggcacctttcaaggtacccgctacttcagctgcgcgcccaagaaggccctgtttgtg
aagctgaaatgctgccgtccggactcccgtttcccctccctacaccactcctccaacccc
atcgagagatgcaactctatcgctttcgggggttatctgagtgaggtggtgcatgagaac
actcctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatc
cagggacactacaactcctgctacctggactccacactcttctgcctgttttccttcagc
tcagtcctggacacagttctgctgaggccgaggtccaagactgacgtagagtattacaga
gagacacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtg
tgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcaggg
ttcacgtctgaagaaaaagatcctgaggagttcctcaatattctgttccatcacatattg
agggtggaccccttactcaagctgaggtcggcaggtcagaaggttcaggactgctacttc
taccagatcttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctctta
gagtggtccttcatcaacagtgacctcaagtttgctgaggctccttcctgccttatcatc
caaatgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccctcactggag
ttagacatcacagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctg
gctctgtatgaatgcagggagtgctacgaggacggtgacatcactgccgggaagataaaa
cagttctgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgc
cacggcaagttgtccgtccccaaggaactgcaggagggtgtgtggcggcagggtagcttc
cctcgccagaggatggagctgttcgctgtgctctgcatcgagaccagtcactacgtagcg
ttcgtcaagtacggccaccaagactccgcatggctcttcttcgacagtatggccgaccgc
gacggagggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcc
tatctgaagatgacccctgaggagctgcacgccctggaccccaagagcatccagggccag
gcccgccgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctg
tacaagtag
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