KEGG   Oncorhynchus keta (chum salmon): 118375581
Entry
118375581         CDS       T09424                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X3
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03015  mRNA surveillance pathway
oke04261  Adrenergic signaling in cardiomyocytes
oke04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118375581
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118375581
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    118375581
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oke01009]
    118375581
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118375581
   03036 Chromosome and associated proteins [BR:oke03036]
    118375581
Protein phosphatases and associated proteins [BR:oke01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     118375581
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     118375581
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     118375581
SSDB
Motif
Pfam: WD40_Prp19 WD40 WDR55 Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 118375581
NCBI-ProteinID: XP_035618050
LinkDB
Position
11:complement(11525620..11692965)
AA seq 288 aa
MDLMVEATPRRVFSNAHTYHINSISVNSDYETYMSTDDLRINLWNLEITNPSFNIVDIKP
ANMEMLTEVITAAEFQPRQCNTFVYSSSKGSIRLCDMRASALCDNHSKLFEEPEDPSNRS
FFSEIISSISDVKFSHSGRYLMTRDYLTVKVWDLNMESKPLETYQVHDYLRSKLCSLYEN
DCIFDKFECVWNGSDSVIMTGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCV
GGKRRKDEISVDSLDFSKKILHSAWHPSENIIAVAATNNLYIFQDKVN
NT seq 867 nt   +upstreamnt  +downstreamnt
atggacctgatggtggaagccactcccaggcgagtattctccaatgcccacacgtaccac
atcaactctatctctgtgaacagtgactacgagacctacatgtccacagatgacctgaga
attaacctgtggaacctggagatcaccaacccaagtttcaacatcgtggacatcaagccg
gctaacatggagatgctgacggaggtgatcacagcagcagagttccaacccagacagtgt
aacaccttcgtctacagcagcagcaagggttccatccggctgtgtgacatgagggcctca
gcattgtgtgacaaccactccaaattgttcgaggagccagaggaccccagtaaccgctcc
ttcttctccgagatcatatcgtccatctcagacgtgaagttcagccacagcgggcgctac
ctgatgacacgggactacctcacggtcaaggtgtgggacctcaacatggagagcaaacct
ctggagacctaccaggtccacgactacctgaggagtaagctgtgctccctgtatgagaac
gactgcatcttcgacaagtttgagtgtgtctggaacgggtctgacagtgtgatcatgacc
ggctcgtacaacaacttcttccgcatgttcgaccgcaacaccaagcgtgacgtgaccctg
gaggcatcgagggagaacagcaagccccgggccatcctgaagcccaggaaggtgtgtgta
gggggcaagagacgcaaggacgagatcagcgtggacagcctggacttcagcaagaagatc
ctgcacagtgcctggcacccctctgagaacatcatcgctgtggccgccaccaacaacctc
tacatattccaagacaaggtcaactaa

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