Oncorhynchus keta (chum salmon): 118375607
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Entry
118375607 CDS
T09424
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118375607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118375607
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118375607
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF3461
JAB
Motif
Other DBs
NCBI-GeneID:
118375607
NCBI-ProteinID:
XP_035618076
LinkDB
All DBs
Position
12:37028716..37033174
Genome browser
AA seq
468 aa
AA seq
DB search
MSVQFRHILSHYPRLNFLSLPYLVARKRSKRMLQLYSPCDVTCLGYPLCLCGNTFDVVFL
TKISMEDSNSYIRVSGFVLGSLMFQHLNSDSDVEGLILGETKAEERSNITDSQIDNIQFE
HTINIQKHISCRKLNSFYNRIGEVNQDEIRHILSNYKEENVIGWYKQRRNTDQQITFREQ
VVHENLKRALSNHELVFLLLTPSEITTSGSTHKLEYAVFRSHGSQYCSVPVLVSNLGLLE
EQDYWRLSASCSSVNYNHAVRKHRSKFFSSDGSLHEVDEINDMNNTLQGELTMACKKVEE
SERLVEKLLADVSDLRRMVNDRKQELGEISADGASTPAQPQENVLLCEVIKTLFPGASLL
QTQALNLQGFPLPDFCCSTDHGIDIATTLPLILSHTLPKARKGRLGRGGGTSWRKRPLRE
SSEVPKRRKGMLEETEESLSVSGSETEEDLIPANQNGNDLDVSNSPVF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtccagtttcgtcacatcctctcccactacccgcgactgaacttcctctcacta
ccatatttggtggcgagaaaacgttctaaacggatgcttcagctttatagcccgtgtgac
gtgacatgtctgggttaccccttatgtttgtgtggtaacacttttgatgttgtctttctg
acaaaaataagcatggaggactcgaactcttatattcgcgtctccggatttgttcttggt
tcattgatgtttcagcacttgaacagtgattctgatgtggaaggtctcattctcggggag
accaaagctgaagagcgaagcaacatcactgactctcaaatcgacaacatacagtttgag
catacaataaacattcagaaacacatatcatgtcgcaagctcaatagcttctataataga
ataggggaggtgaaccaggatgaaataaggcacattttatccaactataaggaggagaat
gtgattggttggtataaacagcggagaaacacagatcaacaaattaccttcagagagcaa
gtagtccacgagaacctgaagagagcactctccaatcacgagctggtctttctgctactg
acacccagtgagatcacaacatcaggctccactcacaaactggagtatgcagtcttcaga
tcacatggcagtcagtattgcagtgtacctgtcctggtcagcaacctgggtttgttggaa
gagcaggactactggagactctctgcatcttgttcatcagtcaactacaaccatgctgtt
aggaaacacagatctaaattcttctcctccgatggatctctgcatgaggtggatgagatt
aatgacatgaacaacaccttgcagggtgaactgacgatggcatgtaagaaagtggaggag
agtgaacgattggtcgagaagctgcttgcagacgtttctgatctaagaaggatggtcaat
gataggaaacaagagctgggagaaatctcagcagatggagcctccaccccggcacagccc
caggagaatgtgctgctctgtgaggtcatcaaaacactatttcctggggcatctctactc
caaacgcaggctctaaacctccaggggtttccattgcctgatttctgctgcagcactgac
catggcatagacatcgctacaacactgcctttgatcctgagtcatacactccctaaagcc
aggaaggggaggcttgggagaggcggaggtacatcctggagaaaacgtccccttcgtgaa
tcatctgaggtgcccaagaggaggaaaggcatgctggaggagactgaggagtctttgtca
gtcagtgggtctgagaccgaggaggatttgatcccagccaatcagaacggaaatgattta
gatgtgtccaattcccccgtcttctga
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