Oncorhynchus keta (chum salmon): 118375611
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Entry
118375611 CDS
T09424
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118375611
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118375611
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
DUF6395
Motif
Other DBs
NCBI-GeneID:
118375611
NCBI-ProteinID:
XP_052325576
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Position
19:complement(12208282..12277298)
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AA seq
990 aa
AA seq
DB search
MDDLVSVAYLPGAGSRAWDYISLHPCLLCDPAGALPIWREASLSVWGWGGLGVVLFLITF
GPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSERHLERCEHSYLPATHTGILKTLDEMRLE
PKPIQIDRRLTGSNYIDEPLQQVIQFALRDYIQYWYYTLSEDDSFLLEIRQTVQNALVQF
STRSKEVDWQPYLTTRLVDDFATHLRVFRKAQDRLEDSKQRDLSEEMVESFFEAEVEMER
NICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQL
SDPDYINQFVIWMIRDSSCNYEAFMNILKLTDRVSELEAVKDKALEELQYLRSLDTAGDD
INVIKNQINSLMFVKKVCETRIQRLQSGKEVDALKLAANLGKLCIIPLEHILVHNIALQF
FMDYMLVAGAQAELFFWLTVEGYRVTAQQQLEVMEGWQKDGRKGGDTKGLLKAAALGVYE
QYLSDKASPRVQVDEASVLQLGEKLQKDSDPTPEIFDDIQTKVYDMMLRDERFYPSFRQS
PLYIRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFIS
DTGVCNDHGKTYALYAVTVLRRNHDGSEDSWKTYRRYSDFHDFHMRITEQVKFENVTAIL
KLPGKKTFNNMDRDFLERRKKDLNSYLQLLLNPEMMKACPTLVHYVYDFLENKQYSKGKG
DFARKMDTFVNPLRSSMRNVSNAVKGLPDSLAGGMNKAADNMGRMSEKLGQDIKQAVFKV
PPMLPKSDFDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQ
LIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKNIRMRTR
VAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVLLEGFLETLFPHY
KFPELFVKLHSRSPRTARYTQKVKSTFPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggtgagtgtggcctacctccctggagctggcagcagagcctgggactat
attagtctccacccctgcctgctgtgtgaccctgctggggcactgcccatctggagagag
gccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttcctcatcactttt
ggaccctttgctgtcttctacctggccttctatatcttctgcttcgtaggaggtggcttt
gcggtcactctgttgtttgggaaaaccaactcagagagacatctagagaggtgtgaacac
tcctatcttccggccacacacacgggtatactgaagacattggatgagatgagactggag
ccgaagcctatacagatagacaggagactgactgggtccaactacatagacgagcctctt
caacaggtcatccagtttgctttgagagattatatccagtactggtattacactctgagt
gaggatgattcttttctgctggaaatcagacagacggtccagaatgctctggtacagttc
tccacacggtctaaagaggtggactggcagccttatttgaccaccagactggtggatgac
tttgctactcaccttcgagtcttcagaaaggcccaagacagactggaggacagtaaacag
agggacttgtcggaggagatggtggagtcattctttgaggcggaggtggagatggagagg
aacatctgtagagacgtggtctgcacctccctgaaggatgaagaagggttcctgagggat
ctgtgtgaggtgctgctctacctgttactacctcctggagacttccacaacaagaacatg
agatacttcctcagggagattctggcgcgaggcgttctccttcccctggtcaaccagctg
agtgatcctgattacatcaaccagtttgttatctggatgatccgggactcgagctgtaac
tacgaggcttttatgaacatcttgaagctgacagacagggtgtctgaactggaggctgtt
aaagacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagacgat
atcaatgtaataaagaaccagatcaacagtctgatgtttgtgaagaaggtctgtgagacc
aggatacagaggctacagtctgggaaggaggtggatgctctgaaactagcggcaaacttg
ggcaagctgtgcatcataccactggagcacattctggtacacaacatcgccctgcagttc
tttatggactacatgctggtggctggggcccaggcagagctgttcttctggctgacagtg
gagggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaaggat
ggaaggaagggaggagacaccaaaggactgctgaaggctgcagcactaggggtgtatgaa
cagtacttatctgataaggcgtcccccagggtacaggtagatgaggcgtctgttctccaa
ctgggagagaagctgcagaaggacagcgaccccacgccagagatattcgacgacatccag
accaaggtgtatgacatgatgcttcgtgatgagaggttctacccgtcgttcagacagagt
cctctctacatcaggatgttagctgagctggacatgctcaaagaaccctcctatagagga
tcagatgacggagacggagaatcgttcaacggttctccaacaggaagcattaatctgtct
ctggatgacctgtcgaactcctgccatgatgacaatatacagctacacgccttcatctct
gatacaggggtgtgtaacgaccacggtaagacctacgccctctacgccgtcactgtgttg
cgccgtaaccacgacggcagcgaagactcctggaagacctaccgacgctactctgacttc
cacgatttccacatgaggatcacggagcaggtgaagtttgagaatgtgacggcgatcctg
aagctgccagggaagaagacgttcaacaacatggacagagacttcctggagaggaggaaa
aaggacctgaactcgtacctacagctgctgttgaatccagagatgatgaaggcctgtcct
actctggttcactacgtctacgacttcctggagaataaacagtacagcaaggggaaggga
gatttcgctcgcaagatggatacgtttgtgaaccccctgcgtagctcgatgcgtaacgtg
tccaacgctgtgaagggcctgccagacagtctggctggagggatgaacaaggctgctgac
aacatgggacgcatgtcagagaaactgggacaggacataaaacaggccgtgttcaaggtg
cctccaatgctccccaagtctgactttgacccagagcactgccgagtctcggcacagctg
gacgacaacgtagatgataacatccccctgcgtgtgatgctgctgttgatggatgaggtg
tttgacctgaaggagaggaaccagtggctccgcaggaacatcaagaaccttctgcagcaa
ctcatcagagccacatacggagacactatcaacaggaagatcgtggatcatgtggacttc
atgacagctccagaacaggtggccgactacgtcaagaagttccgggattcgtactggccc
aacggaatcctggccgagtctccgccacgcagggacaagaacatccgcatgaggacgagg
gtcgcggccaagaccaacctattgggaatcatgccagatgagttgaagcacatcatcggg
gcggatacgactcgtaagggaatcctgcgtgtgtttgacatgttccaacacggaccaatg
aatcgtcggctggtctacgtgctcctagaaggcttcctggagaccctgttccctcactac
aagttccctgagctgtttgttaaactccactctcgctcgccgcgcacagccagatacaca
cagaaagtcaagagcaccttcccgaagaggtga
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