Oncorhynchus keta (chum salmon): 118375703
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Entry
118375703 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118375703
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118375703
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118375703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
118375703
NCBI-ProteinID:
XP_052366058
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All DBs
Position
4:complement(54121816..54129561)
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AA seq
625 aa
AA seq
DB search
MDPPRTRSRSGFFHYGMNGGGNGNNTINNGNMMNASGGIGVNYPQQNNPGWVPHGARGSY
SENQHTQGNYLSGVAQRHPSHGAHRHPGTGVLHFHPDNICSDERDKMEDSPSPKRQRLSQ
QSMLDLSSAPPSTPSSPIRPWELPHTPTTWATPPPSRRPHPHYLPERCHTPVRNRRSPPM
RRQRGRRDRLTSHPHHNSHPQQQQHHHHHYHHHHHNPHHHHSHPHHGLSAGPQDENYRHP
VPPQSYPYNQQPPRGPEERPYHPPNLSPRPLHHPPNLSPRLMHPAAHPQHPPQQQSSVVL
DLHDQGSSQVSYPVSPPGAPPGLSPRSAPPQLPACSVVFSGQHYPVCSVPPSVLQTCSVQ
HLPMPYPFPSLLSSDPTFLLPPPHLSHHPPHLPHHPPHLPQPGQFGPYPTQQARSPLQRI
ENDVELLGEHLSLGAGLHYPPAAHPGLPPHSTQLHFLSHDPLPQEFFGVSYPSFMPRRIP
GRRYRSQQPLPPSPYHPSFLPYFLSMLPVQPTGPAISLELDVDDGEVENYEALLNLAERL
GEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCSHEFHGKCV
DKWLRANRTCPICRADASEVQRDSE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatccgccgaggactcggtcacgttcaggtttctttcattatggcatgaacggtggt
ggcaacggcaataacaccatcaataatgggaacatgatgaatgccagcggagggatcggg
gtgaattaccctcaacagaacaaccctggctgggttccgcacggagcgcgcggtagctat
tcggagaaccagcacacccaggggaactacctgtccggtgtggcgcaacgccacccttcc
cacggagcacacagacaccccggcaccggtgtcctgcacttccaccctgataacatctgc
agtgatgagcgggacaagatggaggacagtcctagcccaaagcgacagcgtctttcccag
cagtctatgttagatctgagctctgcccctccctccaccccatcctctcccattcgtccc
tgggagctaccccacacccccactacctgggccacacccccacccagtcgcaggccacac
ccccactacctgccagagcgatgccacactcctgttcgcaaccgccgcagtcctccaatg
agacgccagcgtggccgccgtgaccgtctcacctcccaccctcatcacaactctcacccc
caacaacaacaacatcatcatcaccactaccaccaccatcaccacaacccacaccatcat
cattctcacccccaccacggcctctcagcagggcctcaggatgagaactaccgccacccc
gtcccccctcagagttacccctacaaccagcaacccccccgggggccagaggagcgcccc
taccacccccccaacctatccccacgccccctccaccaccctcctaacctgtcccccagg
ctgatgcaccctgctgcccacccccagcacccccctcagcagcagagcagtgtggtgctc
gaccttcatgaccagggttcttctcaggtgtcgtacccggtctctccccctggcgcaccc
cctggcctgtctccccgctctgcccccccgcagctcccagcatgctcggtggtcttcagt
ggacaacactaccctgtctgcagtgttcctccatcggttctgcagacatgctctgtgcag
caccttcccatgccctacccattcccctccctgctgtccagtgaccccacctttctcctg
ccccctccccacctgtcccaccatccccctcacctcccccaccatccccctcacctcccc
cagcctggacagtttggaccctaccccacacagcaggccagatcgccattacagaggata
gagaatgacgtggagctgttgggggaacacttgtccttaggggcgggtctccactacccc
cccgcagcccaccccggcctgcccccccactccacacagctccacttcctttcccatgat
ccactgccacaggagttctttggagtgtcatatcccagcttcatgccacgacgtatccca
ggacgacgctaccgctcccagcagccactgccaccctcgccttaccaccccagtttcctg
ccttacttcctctccatgctgccagtccagccaacaggccctgccatcagcctggagctg
gacgtagatgacggagaggtggagaactatgaggcccttctcaacctggctgagcgtctt
ggagaggccaaactcagaggactgaccaagggagacattgaacagctgccttcctatagg
ttcaaccccaacaaccaccaatcagaacagacgctgtgtgtggtgtgtatgagtgacttt
gagtctcgtcagctgctgcgggttctaccctgcagtcacgagttccatgggaagtgtgtg
gacaagtggctcagggctaacaggacgtgtcccatctgtagggctgatgcctccgaggtc
cagcgagactcggagtga
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