KEGG   Oncorhynchus keta (chum salmon): 118375838
Entry
118375838         CDS       T09424                                 
Name
(RefSeq) replication protein A 14 kDa subunit-like
  KO
K10740  replication factor A3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03030  DNA replication
oke03420  Nucleotide excision repair
oke03430  Mismatch repair
oke03440  Homologous recombination
oke03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    118375838
   03420 Nucleotide excision repair
    118375838
   03430 Mismatch repair
    118375838
   03440 Homologous recombination
    118375838
   03460 Fanconi anemia pathway
    118375838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oke03032]
    118375838
   03400 DNA repair and recombination proteins [BR:oke03400]
    118375838
DNA replication proteins [BR:oke03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    118375838
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     118375838
   MMR (mismatch excision repair)
     118375838
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     118375838
SSDB
Motif
Pfam: Rep_fac-A_3 ProRS-C_2
Other DBs
NCBI-GeneID: 118375838
NCBI-ProteinID: XP_035618357
LinkDB
Position
19:27091310..27092963
AA seq 107 aa
MLSRYISRPICFVRRVEKVHPTGNSFSLSDGDWSAASVELNEPLDEELSGVVEVLGMVSN
KGTIMASAYNILREDKGIPFNLELYNEVLKVIHDFPQHYPFGIATSG
NT seq 324 nt   +upstreamnt  +downstreamnt
atgctgtctcgatatatcagcaggccgatttgcttcgttagacgcgttgagaaggtccac
ccaacaggaaactcattcagtctttcagacggagactggagtgctgcgtcagtggaactc
aacgagccccttgatgaggagctgagcggggtggtggaggtgcttggtatggtgtccaac
aaagggacaataatggcctctgcatacaacatactcagagaagacaaaggcattcctttc
aacctggagctgtacaatgaagtcctgaaagtcatccatgatttcccccagcactatcca
tttggaatagccaccagtggatga

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