Oncorhynchus keta (chum salmon): 118375911
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Entry
118375911 CDS
T09424
Name
(RefSeq) nucleolar transcription factor 1-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118375911
03021 Transcription machinery [BR:
oke03021
]
118375911
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
118375911
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
118375911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118375911
NCBI-ProteinID:
XP_035618441
LinkDB
All DBs
Position
5:25272560..25291107
Genome browser
AA seq
750 aa
AA seq
DB search
MNGEMDASTKDQGEIIVNQREIIVVHQVWTQDDLLNLLEAMKVNLPQKDLAKYKTSESHL
DWEKVAFNSFTGEMCKQKWNEVSKVIRKFRTLTELIFDAQDFIKNPYKGKKLKKHPDFPK
KPLTPYFRFFIEKRAKYAKLHPEMSNLDLTKILSMKYRGLPDKKKKKYLEDFQKDKETFG
HSMSKFREDHPDLVESMAKKGSNVPEKPRTPQQLWYSHEKKAFLKTHADATTKDIKDSLG
KQWTQLSDKKRLKWIAKSLEMHKAYEEVMKGFIETHPELNMSNEDIVKSTLTKAERHLKD
KSDGRPDKPPPNGYSMFCAELMSSMKDVPSTERMVMCSQQWKLLKQNEKDGYQKRCEQRK
KEYEVEMNRFLCSISEEEQQRVLGEQKMIGFKKGSGGSKKKSRAKPSPEKPKRPISAMFI
FSEEKRPKLQQERPDLSDSELTRLLARMWNELSDKKKEKYKRLETVLKAESVKKGQEERS
RLPDTPKTAQDIWQQSVIGDYLARFKNDRPKAQKAMEATWNTMEKKEKIMWIKKAAEDQK
RYERELSEMRSPATIIASGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGE
IGGRWQRQPQKEKDRYKKIAEEKQKLYKVELERWLASLSSQERNVYKEYNSQKRKTPVKP
GGTAAKVKAKVIKKSDTEDDDDEEEEKEAASSDNDSSSAEDSEEEDDDDDDDNEEDDDDD
DEEAEDKENKSEGSSSSDSSSVETSDSDSD
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggacgcgtccactaaagaccaaggtgagatcatagtcaatcaacgt
gagatcatagtagtccatcaagtgtggacgcaggacgaccttctgaatctgctagaggcc
atgaaagtcaatcttccccagaaggacctggccaagtacaagacgtcggagtcccatctg
gactgggagaaggtggccttcaactcattcacaggagagatgtgcaaacagaagtggaac
gaggtctccaaagtgatccgtaaatttcgcacattaacagagctgattttcgatgcccaa
gacttcatcaagaacccttataagggcaagaagctgaagaagcatccagatttccctaaa
aagcccctgacaccatatttccgcttcttcattgagaagagggccaagtatgccaagctg
caccctgagatgagcaacctagacctcactaagatcctctccatgaagtacagagggctg
cctgacaaaaagaagaaaaaatatctagaagacttccagaaagacaaagaaacgtttggg
cacagcatgtcaaagttcagggaggaccatcccgacctggtggagagcatggcaaagaaa
ggttctaatgtgccagagaaacccaggacgcctcagcagctatggtacagtcacgagaag
aaggccttcctcaaaacacacgcagacgcgaccaccaaagacattaaagacagtcttggg
aagcagtggacacagctgtcagacaaaaagagactcaagtggattgccaagtccctggag
atgcacaaagcatatgaggaggtgatgaaaggcttcattgagactcacccagagctcaac
atgagcaacgaggacatcgtcaagtccacccttaccaaggctgagcgacatctgaaggac
aaatctgatggcaggccagacaaaccacccccgaatggttactccatgttctgtgctgag
ttgatgtccagtatgaaggacgtgcccagtacagagcgcatggtcatgtgcagccagcag
tggaagctgctgaaacagaacgagaaggacggctaccagaaacgctgcgaacagagaaag
aaagaatacgaagtcgagatgaaccggtttctttgtagtatatcagaggaggagcagcag
cgtgtgctgggggagcagaagatgattggctttaagaagggcagcgggggcagcaaaaag
aagagcagagcaaagcctagcccagagaagcccaaaaggcccatctcggccatgttcatc
ttctctgaagagaaacgtcccaagctgcagcaagagcgaccagacctgtctgacagtgag
ctcaccaggctgctggcacgcatgtggaacgagctctcagataagaagaaggagaagtac
aagcgccttgagactgtcctgaaggcagagtctgtgaagaagggacaagaggagcgcagc
cggctgccagacacccccaagactgcacaggacatctggcagcagagtgtcataggggac
tacctggccaggttcaagaacgaccggccaaaagcccagaaagccatggaagccacttgg
aacaccatggagaagaaggagaagatcatgtggattaagaaggcagctgaggaccagaaa
cgatatgagagggagctgagtgagatgcgctctcctgccaccatcattgcctcagggaag
aagatgaaatttgacggtgaacccaagaaacccccttcgaatggctaccagaagttctct
caggagatgctgtccaacggagagctgaaccacctccctatgaaggagcgcatgggggag
attgggggccgctggcagaggcagccccagaaggagaaggaccgctacaaaaagatcgct
gaggagaaacagaagctgtacaaagtagagctggagcggtggctggcgagtttgtcctca
caagaaagaaatgtgtacaaggagtacaactcacaaaaaagaaaaaccccagtgaaacca
ggaggcactgcagccaaagttaaggccaaggtaatcaagaagtcggacacagaggatgat
gatgacgaggaggaagagaaggaggctgcctcatcagataacgattcttccagtgcagag
gacagtgaggaggaagatgatgatgatgacgatgataatgaggaagacgacgatgatgac
gatgaggaggcggaggataaagagaacaagtcggaggggagtagcagcagtgactcgagc
tcagtggagacatcggactctgattcagactga
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