Oncorhynchus keta (chum salmon): 118375971
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Entry
118375971 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118375971
Membrane trafficking [BR:
oke04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118375971
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
Lpg0393_VPS9
RA_2
RelB
Motif
Other DBs
NCBI-GeneID:
118375971
NCBI-ProteinID:
XP_052383760
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Position
10:70133496..70181327
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AA seq
1037 aa
AA seq
DB search
MAATLPSTLPRPDCHMDRSGSFFKVSDGLTDSDLSMSATLPRPDCHMDRRGSFFKLIDTF
ALEIGELKQEMVQTSPTEDRDPYPMVLQGLEGELSGVYLQSSPCAGTSGERDSGYDSLRR
RMSVLDRLRHTHPVWLLLTLSDTEATHILLQQPPGVFLVRKSSSLQRKVLSLRVSDDDAS
GGAGVCDFPVRESQYTFSLEGSGISFADLFRLVAFYCISRDVLPFTLNLPEAIAASKTQK
DLEEVAQLGAGFWHSALGSLQRTTTPSRPPPQRLDRDGDIQGAERTQEKQSATCHNSVPP
ARPPSSSSSRLERSQSNGALCFVNPLFLQTHRRLEEDPQSSSSSPSPYVTHSTPSPGTTG
GTSSAPVTDPNVTRKSRPPRPPPPHSRLFPPPRSLSQRRQAPPPPTSLPQKPKSSMPETP
AAIVVTRQPLQPSSNQNLRPTPRPPMGARHSSHSKKMTSSAAIPVPHQHPQHPPPRRPNK
PDIDAHRCHIALDDETIAKALSRAKLPRARHRPYPLPPXWDGAGSPPSPPGKTPRREGQE
GRLSDMSISTSSSDSLDYSQLPLSLPASPPLRLRHHLGNNKDSSDDEDLCDEEEEDYGVS
LENDLDQGLRPPFKARRRGVGVGVKVALSFRKVSGVFSTFMTPERRAVRRIAELSRDKSS
YFGCLVQDYISFVQENKGCHTSGLDLLQTLRQFMTQMKAYLTQSSELDPPIESLIPEDQI
DSVLEKAMHKCVLKPLKGIVEVALQDFQVSSGGWQQLRENLALAKTRRPQDLGVDGAVPP
DPMAIEKIRHKFHNMRKMYSPDKKVSLLLRVCKLIYTIMQDNSGRMYGADDFLPMLTYVL
AQCDMPQLDTEILYMMELLDPTLLHGEGGYYLTSAYGAMALIKNFQEEQAARVLSSEARD
TLHQWHRRRTAQRTAPSVDDFQNYLRVALQEVNSGCTAKTLLVHPYSTTEEVCSLCAYKF
KVHDPENHSLFLITEATSQQLALDTHPQRIKAEIHSHPNSQPFHFVYRRVPNLNLCIPAI
PANQHNGNCLLPSQLDE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacgctgccatctacactgcccagaccagactgtcatatggacaggagtggg
agcttctttaaggtctcagatggactcacagactcagacctaagcatgtctgctacgctg
cccagaccagactgtcatatggacaggagaggaagcttctttaagctgatagacacgttt
gcgttggagataggggagctgaagcaagagatggtccagacctccccaacagaggacaga
gacccataccctatggttctacaggggttggagggggagttgagcggggtttacctccag
tcctcgccctgtgctggcaccagtggtgaaagggattctgggtacgactccctgcgtagg
aggatgagcgtgctggacagactgaggcatacgcaccccgtgtggctcctgctcactctc
agtgacacggaggccacacatatactgctgcagcagcctccaggggtattcctggtgagg
aagtcatcctctcttcagaggaaagttctgtctctaagggtcagtgatgatgacgcatca
ggaggagccggcgtctgtgacttccctgtcagagagagtcagtacaccttttctctggaa
ggatctgggatcagttttgcagacctgtttcgcctggtggccttctactgtatcagcagg
gacgtccttcccttcaccctgaatctcccagaagccattgcagcctccaagactcagaaa
gacctggaggaggtggcccaactaggagcaggattctggcactctgctctaggcagcctg
caaaggacaaccactccctctcgccctccaccacagcgccttgacagagacggtgacatc
cagggtgcagaaaggacacaagagaaacagagtgcgacttgccacaacagcgttcctcca
gctcgtcccccttcctcctcctcctctcgcctggagagaagccagtccaacggggctctt
tgcttcgtcaaccccctcttcctccagacacaccggcggcttgaggaagaccctcaatcc
tcttcctcctctccttccccctacgtcacacactccacccccagcccaggaactaccggt
gggacgtcttcagcccctgtcacggaccccaacgtgaccaggaagtcacgtccacctcgg
cccccgcctccccattcccgcttattcccgcccccccgttccctctcccagcgccgccaa
gctccccctccccccacctctctaccccagaagcccaagagcagcatgcccgaaacgccc
gcagccattgttgtcaccaggcaaccactgcaaccttcatccaatcagaaccttcgcccc
acccctcgccctcccatgggtgccaggcacagcagccattccaaaaagatgacaagcagc
gccgccatccctgtgccccaccaacaccctcagcaccctcctccccgacgccccaataaa
cctgacatcgacgcccaccggtgccacatcgctcttgatgacgaaactatcgccaaggct
ctgtcccgtgccaagcttccccgtgccaggcaccggccatacccactccctccatagtgg
gatggtgctggtagccctcccagccctccgggtaagacccccaggcgagagggacaagag
gggaggctgagcgacatgtccatctccacctcttcctcagattctctggactactcccag
cttcccctctccctccctgccagcccccctctcagattacggcatcaccttggcaacaac
aaggacagcagcgacgacgaagacctctgtgacgaagaagaggaagactacggcgtcagc
ctggagaacgacctggaccagggcctccgtcctcccttcaaagcccgtcggagaggggtc
ggagtcggggtcaaagttgcactgagcttccggaaagtttctggagtcttcagcacgttc
atgaccccagaaaggcgagccgtgaggaggatagcggagctctccagggacaagagttcc
tactttggatgcctggttcaggattatatcagttttgtacaggagaataaggggtgtcat
acgtcaggcttagacctcctgcagaccctcagacagttcatgacccagatgaaggcctac
ctgacgcagagctccgaactggacccgcccatcgaatccctcatacccgaggatcagata
gactctgtcctggagaaggccatgcacaaatgtgtgttgaagccgctgaagggcatagtg
gaagtggccctgcaagacttccaggtgagcagtggaggctggcagcagctgagggagaac
ctggccctggctaagacccggaggccccaggacctgggtgtggacggggccgtgccccct
gaccccatggccatcgagaagatccgccacaagttccacaacatgaggaagatgtactcc
ccggataagaaggtgtcgctgctgctccgagtgtgtaaactcatctacaccatcatgcag
gataactcagggaggatgtacggagcagatgacttcctaccgatgctgacctatgtcctg
gcccagtgtgacatgcctcagctggacactgagatcctctacatgatggagctgctggat
cccacactgctacatggagagggtggctactacctcaccagtgcgtacggggccatggct
ctcatcaagaacttccaggaggaacaggcagccagggtcctcagctccgaggccagagac
accctgcatcagtggcaccgccgacgcaccgcccagcgcacggcaccctccgtggacgac
ttccagaactacctgcgagtcgccttacaagaagtcaacagcggctgcacagccaaaacc
ctcctagtccacccgtactccaccaccgaagaagtatgttcgctctgcgcctacaagttc
aaagttcatgaccccgagaaccactccctctttctcatcactgaggcaaccagtcagcag
ctagccctggacacacacccccagcgaatcaaagcagagatacacagccacccaaactcg
caacccttccattttgtctaccgcagagtgcccaaccttaacctgtgtataccagctatc
ccagctaaccagcacaatggcaactgcctactgcctagccaattagatgaatga
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