Oncorhynchus keta (chum salmon): 118376021
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Entry
118376021 CDS
T09424
Symbol
cd74a
Name
(RefSeq) CD74 molecule, major histocompatibility complex, class II invariant chain a isoform X1
KO
K06505
CD74 antigen
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118376021 (cd74a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
118376021 (cd74a)
00535 Proteoglycans [BR:
oke00535
]
118376021 (cd74a)
CD molecules [BR:
oke04090
]
Proteins
118376021 (cd74a)
Proteoglycans [BR:
oke00535
]
Cell surface proteoglycans
Others
118376021 (cd74a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC2-interact
Thyroglobulin_1
MHCassoc_trimer
Motif
Other DBs
NCBI-GeneID:
118376021
NCBI-ProteinID:
XP_035618562
LinkDB
All DBs
Position
4:47456949..47461599
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AA seq
279 aa
AA seq
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MEEQQQRDDALLERTGSQDVILPMTATRGASNSRPLKIAGFTVLACLLLAGQAFTAYMVF
NQRGQIHDMENSNDNMRKQLRNRPPAVAPVQMHMPGLNMPRLIDFTDEDTKTEKTPMTKL
EATAIVSLEKQVKDLLQSPQLPQFNETFLANLQSLKRQVEEAEWKGFETWARNWLLFQMA
QEKPPAPTTPQPAAGLQTKCNLEKSFPGHKLGSYLPQCDEQGNYLPMQCWHATGFCWCVD
KNGKIIEGTSMRGKAICDRVPSRMAAFPRMMQLKEYKDE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaacagcaacgtgatgatgctctcctggagcgcacagggagccaggacgtg
atcctaccaatgacagctacaagaggggcttctaacagccgtccgttgaagatagcgggg
ttcacagtgttggcctgtcttctcctggccggccaggccttcactgcctacatggtcttc
aaccagaggggccagatccacgacatggagaatagcaatgacaacatgcgcaagcagctg
agaaacagacctccagcagtagcccctgtccagatgcacatgcccgggctcaacatgccc
cggctgatagacttcactgatgaggacaccaagacagaaaagactcccatgacgaaattg
gaggccactgccattgtgagcctagagaagcaggtgaaggacctgctacagagcccccag
ctgccccagttcaacgagacgttcctggccaacctacagagcctgaagagacaggtggag
gaggccgagtggaagggttttgagacttgggcacgtaattggctgctcttccagatggcc
caggagaagccccctgcacccaccacacctcagcctgccgctggcctgcagaccaagtgt
aacctggagaagtcgttccccggccataagcttggttcctacctccctcagtgtgacgag
cagggcaactacctgcccatgcagtgctggcacgccactggtttctgctggtgtgtggac
aagaacggcaaaatcatcgagggcaccagcatgcgtggcaaagccatctgtgacagagtc
cccagtcggatggcagctttccccaggatgatgcagctgaaggagtacaaggatgagtaa
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