Oncorhynchus keta (chum salmon): 118376036
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Entry
118376036 CDS
T09424
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118376036 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118376036 (uvssa)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
118376036 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
INTS1_R4
LBD_receptor
DUF1195
Motif
Other DBs
NCBI-GeneID:
118376036
NCBI-ProteinID:
XP_035618580
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All DBs
Position
30:complement(23043119..23073220)
Genome browser
AA seq
733 aa
AA seq
DB search
MDHAQRDKLSELVEELTTSGEPQLNPNKLKEVKKICKVSNDYIEHFYHLTMTQLAQEHAE
IRLSAFQMVSELFTRSHHFRVLLVDNFQEFLDLTVETDSDEPLPPPKEVARKLKTIAIKT
VQEWQATYGEAYKKLALGYHFLKQVKKVDFHDVQARTLAERKREEERQKRLERIYKDKVE
KATKEMEDASEEIEECLTEINNCIKLLLPAEFDLSDLDTSTPANNSTVSVSSVPNEKAST
YSDLDEQPCCSKDLELQREPKNPETSTATKTNEEKEEEDPSDEDSDIEDVLVEDAFIRNT
GLISHKYSLDLNLSTDLKLKETEENEAVVNTMKDLHKLLSTKHLPVVQYWVQVFIKAGVP
EPLLRRAIDLKSSLERALQKHEDLHIDYKARHRRVMKAPEGSDDDDDDFEEVPEKEGFES
HIPDHLREEYGLEPSPSTSVACKKPVQPPVKCPATGASHTLSRPRKRATDEEQDPTCAAA
TLRLFKQRLLPQPPSTSSAAGGHVDPTYQTSEDRDKAPVIPFGLDLYYWGEEQPTAGKII
KNSSQHQFWVPNEVEEEVENKELAAQMKSRYITFAGRFQPVKHRCKTPMPNGGLCERQDR
VKCPFHGPIIPRDELGKPTNPEDAVRLEKEEWKRREDQPDWRDPELMRDIELATGEDLGS
SKTFGKGKKGKGKGKKKKYPNLSDLKKGVNTSRSRLEKKVFNPSSMRRVTDVMNKMDKLK
HAKFANQFNYALN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgcacaacgagataagttgtcagagctcgtggaagagttgaccacatctggg
gaaccacaactaaatccaaataaactgaaggaagtgaaaaagatatgcaaagtttccaac
gactacattgaacacttctaccacctgaccatgacgcagctggcccaggagcatgccgag
atccgcctgtcagccttccagatggtcagtgagctcttcacccgctcacaccacttcagg
gtcctgctggtggacaacttccaggagtttctggacctgacagtggagacggactcagat
gagcctcttccaccacccaaagaggtggcccgaaagctgaagaccattgccatcaaaact
gtgcaagaatggcaggccacttatggagaagcctataagaaactggccttgggctaccac
tttctcaagcaggttaaaaaggtggactttcatgatgttcaggccagaacactagctgag
aggaaacgagaggaggagagacagaaaagactggagaggatttataaagacaaagttgaa
aaggccaccaaggaaatggaagacgcctcagaagagattgaagagtgtcttacagagata
aacaactgcataaagttgcttctgcctgcagagtttgacctcagtgacctagatacctca
actccagccaataattcaaccgtttctgtctcttctgtgcctaatgagaaggctagcacc
tacagtgacctagacgaacagccctgttgtagtaaagacctggagctccagagggaaccc
aagaatccagagacaagtacagcaacgaaaaccaatgaggagaaggaggaagaggatcct
agtgatgaagacagcgatatagaggatgttctggtagaagatgcattcatacgcaacaca
ggactcatatctcacaaatacagcctggacctgaacctctccacagatttaaagctaaag
gagacagaggaaaatgaagcagtggtgaacaccatgaaggacctgcacaaactgctcagc
actaaacacctgcctgtcgtccagtactgggttcaggttttcatcaaggcgggtgtgcca
gaaccgctcctcagacgtgccatagacttgaagtcgtcgctggagagagctctgcagaaa
catgaagacctgcacattgactacaaggccaggcatcgcagagtgatgaaagcgccggag
ggcagcgatgacgacgatgatgactttgaggaggttccggagaaggagggttttgaatcc
cacattccagaccatctacgggaggagtatggtttagagccgtccccctctacctctgtg
gcctgtaagaagccggtgcagcctccagtgaagtgtcctgcaacaggagcctctcacacc
ctctccagacccaggaagagagccactgacgaggagcaggaccccacctgtgcagccgcc
acactccgcctcttcaagcagcgcctcctaccccagccaccgagcaccagctctgcagca
ggaggtcatgtggaccccacataccagactagtgaggacagggacaaagctccagtcatc
cccttcggtttggacctctactactggggagaggagcaacccactgcaggcaaaatcatc
aagaatagctcccagcaccagttctgggttcccaacgaggtagaggaagaggtggagaat
aaggagctggctgcccagatgaagtccaggtacatcacgttcgctggccgcttccagccc
gtcaagcacaggtgcaaaacccccatgcccaacggaggcctctgtgaacgccaggaccga
gtcaagtgtcctttccatgggccgatcatcccacgagacgagctgggaaaacccaccaac
cctgaggacgctgtgcggctggagaaagaggaatggaaacgtagagaggaccagcctgac
tggcgggaccctgagctgatgagggacatagagcttgccactggggaggacctggggtcc
tccaaaacctttgggaagggcaagaaaggcaaggggaagggcaagaagaagaagtacccc
aacctcagtgatctgaagaagggtgttaacacttcacgctccagactagagaagaaggtt
ttcaacccgagctccatgaggcgagtgacagacgtcatgaataaaatggacaaattgaaa
cacgcaaagtttgcaaaccaatttaattatgcactgaattaa
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