Oncorhynchus keta (chum salmon): 118376076
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Entry
118376076 CDS
T09424
Symbol
utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog isoform X1
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118376076 (utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118376076 (utp6)
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118376076 (utp6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
118376076
NCBI-ProteinID:
XP_035618636
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Position
10:complement(67500513..67511617)
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AA seq
594 aa
AA seq
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MAEIVQQRIENRIPELEQLERVGLFSKKEVKSMLKRATALEYKLHRLIITKVDFIAYIQY
EINVLELIKKRRSRIGYQFKREEIEYSIISRINNIFRRATTKWKDDVQLWLSHIAFCKKW
NTKVQLSKVFSSMLAIHPEKPALWIMAAKSELEDRNLSESARHLFLRALRFHPESKKVYQ
EYFRMELLHAEKLRKQQKELEQAEMDVGEYEFSPEIMSGKLAELVYRDATGKIQGADFIL
SLLTIAAIFDFTKELQDTIIQDLQSKYTDDSLTWDFMAKRELEATVGEELQTAKGRASDI
TRREERCCQVYEEGLKSLNTEAMWACYVSFCLERFKRKTNVQELKEKRQERLLAVLQRAH
DSSMLKEEFYKNWLQVLLSSGDSEQTAAVAMAATQRYRQSVDVWCLALQTMVHLGSGATG
KLFQDALKHVNPKLSLPLWQLQVEWSMTSQSPEETEALFQRGLLSVVPAVSMEIKEKYLD
WSYRAGGYKKARKTFTSLQESRPFSKAFFTRMIQMEKNQETPKMSNLRDFYERALREFGS
TDDDLWLEYIREELGPSGQPENCGMIHWRAMKMLEGESVERFTAQYTLLQTGHI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatagtccaacagcggatcgagaatcgaatcccagagttagaacagttggag
agagtgggactgttcagcaaaaaagaagtcaaatccatgctaaaaagggcgacagcttta
gaatacaaactgcatcgattgatcataaccaaagttgacttcattgcatacattcagtat
gaaatcaatgtattagagctgataaagaagagaagatcacgcatcggctatcagttcaaa
agagaggagatagagtattccatcatctcgaggatcaacaacattttcagaagggccaca
actaaatggaaggatgatgtgcagctgtggctctctcacattgctttctgtaagaaatgg
aacacaaaggttcaactcagcaaggtgttctcctccatgctcgccattcatcctgagaaa
ccagccctctggatcatggctgccaagagcgagctggaggacagaaacttgtcagagagc
gccagacacctgttcctgcgtgccctgcgctttcacccggaaagcaagaaggtctaccaa
gagtacttccgtatggagctgttgcacgctgagaaactgaggaagcaacagaaggagctg
gagcaggctgagatggacgtgggagagtacgagttctcccctgagatcatgagtggcaaa
ctggccgagttggtgtacagagatgctactgggaaaatccaaggagccgatttcatcctg
tctcttttgaccatcgccgccatctttgacttcactaaagaactacaggacaccattata
caagacctgcagagcaaatacacagacgactcactgacgtgggacttcatggccaagcgg
gagctggaggcgacggtgggggaggagcttcagacagccaaggggcgggcctctgacatc
accaggagagaggagcgctgctgccaggtctacgaggagggcctcaaaagcctcaacaca
gaggccatgtgggcgtgctacgtgtccttctgcctggagaggttcaagaggaaaaccaac
gtccaggagctgaaggagaagaggcaggagaggctgctggcagtgcttcagcgtgcccac
gactcctcaatgctgaaggaggaattctacaagaactggctgcaggtcttactctcatca
ggagactcggagcagaccgctgcggttgccatggcagccacccagcgctacagacaatct
gtggacgtgtggtgcctggccctgcagacgatggtgcatctggggagtggcgccacaggc
aagctattccaggacgccctgaaacacgtgaatcccaagttgagtttgcccctgtggcag
ctgcaggtggagtggagcatgacatcacagagcccagaggaaactgaggccctgtttcag
agaggtctgctgtctgtggtgcctgccgtttccatggagataaaggagaaataccttgac
tggtcctacagggccggaggctacaagaaagccaggaagaccttcacaagtttgcaagag
agccggcccttctccaaggcctttttcaccagaatgatccagatggagaaaaatcaagag
actcccaagatgagcaacctgagggacttctatgagagagccctgagggaatttggctcc
acagatgatgatctgtggctggagtacatccgagaggagcttgggcccagcggccagcca
gaaaactgtgggatgatccactggagagccatgaagatgctggagggggagagtgtggag
agattcaccgcccagtacaccctgctgcagactggacacatctag
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