Oncorhynchus keta (chum salmon): 118376102
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Entry
118376102 CDS
T09424
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118376102
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
118376102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
MS_C
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
118376102
NCBI-ProteinID:
XP_035618672
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Position
4:47567178..47572802
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AA seq
254 aa
AA seq
DB search
MYVSKNTGMYTGMYSNSVGHPTQPLNSQNFMQYTDFTGYHHVTGISDPHAQTTGVWNPAY
LAGPREEWSPYGQSVDFHGSSPGTEQIHFSSPDLTSILPTGPGTLPSLNSPAGQYSPDSE
RRNSYDWIRHNVHSSSTGGKTRTKDKYRVVYTDQQRLELEKEFQYSRYITIRRKTELALG
LSLSERQVKIWFQNRRAKERKITKKKIQLSQQTSKTTTTLTFTPSCLADPSNGSMATSSS
LLSETISMTIKEEY
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgagtaaaaacaccggaatgtacaccggaatgtactcaaattctgtgggacac
ccgactcaacctctgaatagtcagaacttcatgcaatatacggatttcaccggttatcat
cacgtcacaggcatcagtgacccacatgcccagacgacaggtgtgtggaaccctgcttac
ttagcaggtccgcgggaggagtggtcaccgtatggccagagcgtggacttccacggttcg
agcccaggtacagaacagatacatttcagttccccggacctgacatccatcctgcctacg
gggccgggtactcttccatcactcaactcccctgccgggcagtactctccagactcagag
agaagaaactcatacgactggatcagacacaatgtacattcatccagtacaggagggaag
acgcggaccaaggacaagtacagggtggtgtacacagaccagcagcgcctagagctagag
aaggagttccagtacagccggtacatcaccatcaggaggaagacagagttggccctgggc
ctcagcctctcagagagacaggtaaagatctggttccagaacaggagagccaaggagagg
aaaattaccaagaagaagatccagctgtcccagcagacctctaagactacaactaccctg
acctttaccccatcctgcctggctgaccccagcaacggctccatggcaaccagctccagc
ttgttgtcagagacaatatcaatgactatcaaagaggagtactga
DBGET
integrated database retrieval system
