Oncorhynchus keta (chum salmon): 118376117
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Entry
118376117 CDS
T09424
Name
(RefSeq) prolargin-like
KO
K08125
prolargin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118376117
Proteoglycans [BR:
oke00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
118376117
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
118376117
NCBI-ProteinID:
XP_052329705
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Position
21:34229531..34243067
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AA seq
380 aa
AA seq
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MKAAVGLYSALVLCLLMGAVFSQRPRPKKPPKPPKATKRPSFKPSLPTDELEPQEPTDFP
PPILGPPSMFLDCPRECFCPPSFPNALYCENRNLRTVPVIPSRVHYLYLQNNYISVVTAE
PFNNATELRWVNMANNRIRKVDKQVFEKVPGLLFLYMERNQLKEVPDDLPAGLEQLILSH
NQISKIPSGAFGKMEHLALLDLHHNKLSDSDVGKNTFKDMKNLVQLNLAHNILKKMPANI
PNGITQLFLDRNNIEDIPKDYFQGFSNLAFVRLNFNQLSDKGVPKAVFNVSTLLDLHLAH
NQLTSVPLFNPQLEQLHLNHNSIESINGTQLCPFSLSSESLTDEALMPRLRYLRLDGNHL
SPPVPLDVIMCFRHLKSIVI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagctgtgggactctactctgccctggtgctctgtctcctgatgggggcagtg
ttctcccagagaccgagacctaaaaaacctcctaagcctcctaaggccaccaagcggccc
tctttcaagcctagcctgcccactgatgagctggaaccccaggagcccacagacttcccc
cctcccatccttggccccccctccatgttccttgactgcccccgcgagtgtttctgcccc
ccctccttccccaacgccctctattgtgagaaccggaacctccgtacggtccctgtgatc
ccgtcgagagtccactacctttacctgcagaacaactacatctctgtggtaacagcggaa
cccttcaataacgccacagagctgcgatgggttaacatggccaacaatcgcataagaaaa
gtagacaagcaggtgtttgagaaggtacctggtctgttgtttctctacatggagaggaac
cagctgaaggaggttcctgatgacctgccagctgggttggagcagctcattctcagccac
aaccagatctccaagatcccctctggagccttcggcaagatggagcaccttgctctgctc
gacctgcaccacaacaagttgagtgacagtgatgtggggaagaacacttttaaagacatg
aagaacctggttcagctgaacttggcccacaacatcctgaagaagatgccagctaacatc
cccaacggcatcacacaactattcctggacaggaacaacatcgaggacatccctaaggac
tacttccaaggcttctccaacctggcgtttgtgagactcaacttcaaccagctaagtgat
aagggagtacctaaggctgtgttcaacgtttccaccctgctagaccttcacctggcccac
aaccagctcacctccgtccccctgttcaacccccagctggagcaactgcacctcaaccac
aacagcattgagagtattaacggaacccagctttgtccattcagtctgtcctctgagagt
ctgactgatgaggctctgatgcccaggctcaggtacctgcgtctggatgggaaccacctg
agccctcctgtccctctggatgtcattatgtgtttcagacacctcaagtctattgtcatc
tag
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