Oncorhynchus keta (chum salmon): 118376175
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Entry
118376175 CDS
T09424
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X4
KO
K07573
exosome complex component CSL4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118376175 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118376175 (exosc1)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118376175 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
118376175 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
SPK
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
118376175
NCBI-ProteinID:
XP_035618753
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All DBs
Position
10:79601103..79611866
Genome browser
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDRLCSTEDCMPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDRVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgataggctatgcagcacagaagactgtatg
cccggtactggggtgtacctacgacacggctacatctactcctcgctagcaggctacgta
ctcaggaagaacgaaggagaggagctaccagtcatctcggtggtgagagaaaccgaggct
cagctactaccagatgtaggagccatagtgacctgtaaggtgaccagtatcaaccccagg
tttgccaaggtccacatcctctacgttggttccacaccactgaaggaccgttttagagga
accatcaggaaagaagatgtacgagcaacagaaaaagacagggtggagacgtataaaagc
ttccgtcctggagacatcgtcctggctaaagtcatctccctgggagacgtccagtccaac
tacctgttgactacagcagagaacgagctgggggtggtggtagcccacagtgaagcagga
gcccagatggtgcctatcagctggtgtgagatgcagtgcccacggacacacgccaaagag
ttccgcaaggtggccagggtgcaacctgagtacctgcaggcctga
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integrated database retrieval system
