KEGG   Oncorhynchus keta (chum salmon): 118376254
Entry
118376254         CDS       T09424                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagosome
oke04210  Apoptosis
oke04530  Tight junction
oke04540  Gap junction
oke04814  Motor proteins
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118376254
  09143 Cell growth and death
   04210 Apoptosis
    118376254
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118376254
   04540 Gap junction
    118376254
  09142 Cell motility
   04814 Motor proteins
    118376254
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118376254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118376254
   03036 Chromosome and associated proteins [BR:oke03036]
    118376254
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    118376254
   04147 Exosome [BR:oke04147]
    118376254
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118376254
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118376254
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118376254
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118376254
  Exosomal proteins of other body fluids (saliva and urine)
   118376254
  Exosomal proteins of colorectal cancer cells
   118376254
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 118376254
NCBI-ProteinID: XP_052355921
LinkDB
Position
37:26378774..26382838
AA seq 450 aa
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSIGEEDEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttctatgcatgtcggccaggccggagcccagatgggcaatgcatgc
tgggaactgtactgcctggaacatgggatccagcctgatggacagatgcccagtgataag
acaatcggagggggagatgactccttcaacaccttcttcagtgagactggggctggtaaa
catgttcctcgtgcagtctttgtagacctggagccaaccgtcatcgacgaggtccgcaca
ggtacctaccgccagctgttccaccctgagcagctgatcacaggcaaggaggacgctgcc
aacaactatgcccgtggtcactacaccatcggcaaggagatcatcgacctggtactcgac
cggacgcgcaaactggctgaccagtgcactggtctccagggcttcctgatcttccacagc
tttggaggcggcaccggctctgggttcacctccctgctgatggaacgtctctctgtcgac
tatggaaagaagtccaagcttgaatttgctgtttaccctgctccccaagtttctactgct
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactcagactgt
gccttcatggtggacaatgaggccatctatgatatctgccgcaggaacctggacattgag
cgccccacctacaccaacctcaacaggctgattggtcagatcgtctcctccatcaccgcc
tccctgcgtttcgatggagccctcaatgtggacctgacagagttccagaccaacttggtg
ccttacccccgtatccacttccctctggccacctatgctccagtcatctctgctgagaag
gcctaccatgagcagctgtctgttgctgacatcaccaacgcctgctttgagccagccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctctaccgt
ggtgatgttgtgcccaaagatgtcaactctgccatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactggcttcaaggtcggtatcaactaccagccaccc
acagtggtccctggaggagatctggccaaggtccagagagctgtgtgtatgctgagcaac
accaccgccatcgctgaggcctgggccaggcttgaccacaagtttgacctgatgtacgca
aagagagcctttgtgcactggtatgtgggagagggcatggaggagggagagttctcagag
gccagagaagacatggcagccctggagaaggattatgaagaggtgggtactgacagcatc
ggagaagaggatgaagaaggagaggagtactaa

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