KEGG   Oncorhynchus keta (chum salmon): 118376292
Entry
118376292         CDS       T09424                                 
Name
(RefSeq) coatomer subunit beta'-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118376292
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118376292
Membrane trafficking [BR:oke04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    118376292
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   118376292
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_HPS5 PEP5_VPS11_N WD40_RFWD3 Beta-prop_SCAP Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 118376292
NCBI-ProteinID: XP_052323872
LinkDB
Position
18:32870654..32908108
AA seq 1616 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYNGSVCVWNHETQTLVKTFEVCELPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERAHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWVCGQVFEGHTHYVMQIAINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHTQNVSCVSFHPE
LPIILTGSEDGTVRVWHSSTYRLENTLNYGMERVWCVCGQRGANSVALGYDEGSIIIKLG
REEPAMSMDSNGKIMWAKHSEVQQANLKAMGEADIQDGERLSLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWGHDSSEYATRESTSMVKIFKNFKE
NKSFKPDFGAEGIHGGFLLGVRSVSGLAFYDWENTELVRRIEIQPKHVFWSESGELVCIA
TEESFFVLRYLAEKVATAQETKEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTVAHLDRTMYLLGYIPKDDRLYLGDKELNIVTYSLLVSVLEYQTAVMR
RDFGMADRVLPTIPKEMRTRVAHFLEKQGFMQQALAVSTDSEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFVLAQECLHHAQDYGGLLLLATASGNTTMVGKLAEGAE
RDGKTNVAFLTYFLQGKLDKCLELLIKTNRLPEAAFLARTYLPSHVSRVVKLWKESLGKV
NQKAADALANPTDYSNLFPGLQEAFLAENYLKETHVRLRPAAEYPLITSNENRNVLGESA
VYVPKVVPADPEVAGSMDETPVLEAVVETPVMAAVVEATAPEAPVVEESIVMEEVEPVAA
AVVEFIPAVEESIPVTVVEPTMAAVEESIELAEEEPIIVEVEAPKPKEATSVEDIITKIE
ALVTIENDTEAPLLVPEVAQSTPEEEFRATPEEAVEEGPATMKAIATDTPVTELITEPIV
TEAPVAEEAPVPIATEPEPVTIEAVVEAEAPIAAAVLEAIATEPMVTEQAPVTIEVAVAA
EAPITEAVAEAIAASEKAPVIVEENEPAPAPLIDLAPARDLASAIDLAPARDLASAIDLA
PARDLASAIDLAPARDLASAIDLAPARDLAPAPLIDLAPAPLIDLAPAIDLAPAPLIELA
PVIDPATTPTVEDKAAAAPAVEPLPALTQVVPPGAELAPAAPLAALLEGNGVEEAAPLAA
LFEVKGVEEAAPLAALLEGKGMEEAAPLAALLEGKGMEEAAPLAALLEGKGMEEAAPLAA
LLEGKGMEEAAPLAALLEGKGMEEAAPPAALLEGKGVEEAAPVAALLEGKGVEEAAPVAA
LLEGKGVEEAAPVTALLEGKGVEEAAPVAALLEGKGVEEAAPLAALLEGKGVEEAAPLAA
LLEGKGVEEAAPVAALLEGKGVEEAAPVAALLEGKGVEEAAPLAALLEGKGVEEAAPLAA
LLEGKGVEEAAPLAALLEGKGVEEAAPLAALLEGKGVEEAAPVAALLEGKGVEEAAPLAA
LLEGKGVEEAAPVGVATASMDLLDLNDEGLDDLDMFDLDDDIDTTDINLDDDFLDD
NT seq 4851 nt   +upstreamnt  +downstreamnt
atgcctctccggttggacatcaagcggaagctgaccgctcggtcggaccgtgtgaagagt
gtggacctgcacccaactgaaccatggatggttgccagcctgtacaatggcagtgtctgt
gtctggaaccacgagacacagaccctggtgaagacattcgaggtgtgtgagctgcctgtg
agagtggctaagtttgtggcgaggaagcactgggtcattgctggagcagatgacatgcag
atccgtgtgtttaactacaacactctggagagagctcacatgtttgaggcccactctgac
tacatccgctgcatcgcagtccacccaacacagccttacatccttaccagcagtgatgac
atgctgatcaagctttgggactgggacaggaagtgggtgtgtggtcaggtgtttgagggc
cacacccactatgtcatgcagatcgccatcaaccctaaagacaacaaccagttcgccagc
gcctccctggacaggaccattaaggtgtggcagctgggatcttcctcccctaacttcact
ctggagggccatgagaaaggagtcaactgtatcgactactacagtggaggggacaagccc
tatcttatatcaggagctgacgaccgcctggtcaagatctgggactaccagaataagaca
tgtgtgcagactctagagggccatacccagaatgtgtcctgtgtcagctttcaccctgag
ctgccaatcattctcacaggctccgaggacggcacagtgagagtctggcattccagcacg
taccgcctggaaaacacactgaactatgggatggaacgtgtgtggtgtgtgtgtggccaa
cgaggcgccaacagtgtggcgctgggatatgatgaaggcagcatcatcatcaagttgggt
cgcgaggaaccagccatgtctatggactctaacggtaagatcatgtgggccaagcactct
gaggtgcagcaggccaacctgaaggccatgggagaggccgacatacaggacggagagagg
ctgtccctggccgtcaaagacatgggcagctgtgaaatctatccccagaccatccagcac
aaccccaacggcaggtttgtggtggtgtgtggggatggagagtacatcatctacactgca
atggccctgaggaacaagagcttcggttcagcacaggagtttgtctggggccacgactcg
tcagagtatgctactcgggagagcaccagcatggtcaaaatcttcaagaacttcaaggaa
aataagtcttttaaaccagactttggggcagaaggtatccatggtgggttcttgctgggc
gtgaggtcagtgagtggtctggccttctacgattgggagaacacagagctggtccgccgc
attgagatccagcctaaacacgtcttctggtcagagtctggggagctggtgtgtattgcc
acggaggagtctttctttgtgctgcgctacctggctgagaaagtggcaacagcacaggag
accaaggagggagtcaccgaggatgggatagaggatgccttcgaggtgttgggtgagatt
caggaggtggtgaagactggtctgtgggtgggagactgtttcatctacaccagctcagtc
aacagactcaattactacgtaggaggagagattgtcaccgtcgcccacctggacagaact
atgtacctgttgggctacatccctaaggatgaccgtctgtatctgggtgataaggagctg
aacatcgtcacttactctctgctggtgtcagtactggagtaccagacagctgtaatgagg
agggactttgggatggccgacagggtcctacccaccatccctaaagagatgaggaccagg
gtcgcccactttttagagaaacagggtttcatgcagcaggctctggctgtgtccacagac
tcagaacacaggtttgagttggctctgcagctaggagaactgaagatcgcctaccagctg
gctgtagaggctgagtcggagcagaagtggaagcagttggcagagctggccaccactaag
tgccagtttgtcctggcccaggagtgtctgcaccatgcccaggactatggggggctactg
ctgttggccacagcctcgggcaacaccaccatggtgggcaagctggcagagggggcagag
agagatggcaagaccaacgtggctttcctcacctatttcctccaggggaaactggacaaa
tgtctggagctcctcattaaaaccaaccggctgccagaggctgcattcctggccagaaca
tacctgcccagccatgtgtctagagtggtgaagctgtggaaggagagcctggggaaggtg
aaccagaaggcggctgatgcgttggccaaccctacagactacagcaacctgttccccggc
ctacaggaggccttcctggccgaaaactacctcaaggagacccacgtcaggctgaggccc
gccgcggagtaccctctcatcacctccaatgagaataggaatgtcctgggggaatctgca
gtctatgtgccaaaagtagtgcctgctgatccagaggttgctgggagcatggatgaaacc
cctgtattggaagcagtggtagaaacccctgtaatggcagcagtggtggaggctacagcc
ccagaagctccagtagtggaagagtccattgtcatggaagaggtagaacctgttgcagct
gcagtcgtggagtttatcccagcagtagaagaatctatcccagtgacagtagtggaacca
actatggctgcagtggaagaatccattgagttggcagaggaggaacccattattgttgaa
gtggaagctcccaagccaaaggaggcaacatcagtggaagatatcatcactaagatagag
gctcttgtcaccatagaaaatgacacagaagcacccctcttggtgccagaggtagcacag
tccaccccagaggaagagttcagagcaacaccagaggaggccgttgaggaaggacctgca
acaatgaaggccatagcaacagatacacctgttacagagttgatcacagaacccattgta
acagaagcaccagttgccgaggaagcgccagtgcctatagcaacagaaccagaacctgtt
accatagaagcagtggtggaagctgaagcacccattgccgcagcagtactagaagccata
gcaacagaacccatggttacagaacaagcacctgttaccattgaagtggcagtggcagca
gaagcacccattactgaggcagtagcagaagccatagcagcatctgaaaaagccccagtc
attgtagaagagaatgaacctgccccagcaccactcatagacctagccccagccagagac
ctagcctcagccatagacctagccccagccagagacctagcctcagccatagacctagcc
ccagccagagacctagcctcagccatagacctagccccagccagagacctagcctcagcc
atagacctagccccagccagagacctagccccagctccactcatagacctagccccagca
ccactcatagacctagccccagccatagacctagccccagctccactcatagaactagcc
ccggtcatagatccagctacaaccccaactgtagaggacaaggctgcagcagccccagcg
gtagagcccctaccagcactcacccaggtggttccaccaggcgcagagctagcccctgca
gcccctctagctgccctcttagagggtaacggtgtggaggaggcagcccctctagctgcc
ctcttcgaggttaaaggtgtggaggaggcagcccctctagctgccctcttagagggtaaa
ggtatggaggaggcagcccctctagctgccctcttagagggtaaaggtatggaggaggca
gcccctctagctgccctcttagagggtaaaggtatggaggaggcagcccctctagctgcc
ctcttagagggtaaaggtatggaggaggcagcccctctcgctgccctcttagagggtaaa
ggtatggaggaggcagcccctccagctgccctcttagagggtaaaggtgtggaggaggca
gcccctgtagctgccctcttagagggtaaaggtgtggaggaggcagcacctgtagctgcc
ctcttagagggtaaaggtgtggaggaggcagcccctgtaactgccctcttagagggtaaa
ggtgtggaggaggcagcccctgtagctgccctcttagagggtaaaggtgtggaggaggca
gcccctctagctgccctcttagagggtaaaggtgtggaggaggcagcccctctagctgcc
ctcttagagggtaaaggtgtggaggaggcagcccctgtagctgccctcttagagggtaaa
ggtgtggaggaggcagcccctgtagctgccctcttagagggtaaaggtgtggaggaggca
gcccctctagctgccctcttagagggtaaaggtgtggaggaggcagcccctctagctgcc
ctcttagagggtaaaggtgtggaggaggcagcccctctagctgccctcttagagggtaaa
ggtgtggaggaggcagcccctctagctgccctcttagagggtaaaggtgtggaggaggca
gcccctgtagctgccctcttagagggtaaaggtgtggaggaggcagcacctttagctgcc
ctcttagagggtaaaggtgtggaggaggcagcacctgtaggagtagcaacagcatccatg
gacctgctggacctgaatgatgagggccttgacgacctggacatgtttgatctggacgat
gacatcgacaccacagacatcaatctggacgatgacttcttagacgactga

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