Oncorhynchus keta (chum salmon): 118376314
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Entry
118376314 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118376314
04082 Neuroactive ligand signaling
118376314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118376314
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118376314
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
118376314
NCBI-ProteinID:
XP_052372571
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Position
4:77800667..77893678
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AA seq
549 aa
AA seq
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MCVLLTRIKTVTMGKLRKNHFGILTFSFFFTCICCAQSAKDLRDPSNMPLVKDTVDRLMK
GYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIALNL
TLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLR
RYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLVSKNVVFS
TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTM
TTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKRAAEKL
AVVNNEKLRPDPNKWMVGNVVQRDDALYARMKQREIDAYDTMWDPIFVDDAALGLGEQRN
KMTASLTDDNILFGSLEMKNEMGGVPSELSRSLGPGGLGDPRNTMLAYDSSTLQYRRAAM
ARQNYGGGPHSALERHATQKKSRLRRRASQLKVNIPDLADVNSIDKWSRMIFPTVFSFFN
VIYWLYYAH
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgttctcctcactcgcatcaaaactgttacgatggggaagctcaggaaaaaccac
tttggaattttaacgttttcgttcttttttacttgtatctgctgtgcgcaaagcgccaaa
gatctgagggatcccagtaatatgccgctggttaaagacacggtcgacagactgatgaaa
ggctacgacattcggttgaggccagattttggaggtgcgccggtggcagtggggatgaat
atagacatagccagcatagacatggtgtctgaagtcaatatggactacacgttgaccatg
tacttccagcaggcctggcgggacaagcgtctgtcctactctgagatagccctcaacctg
acgttggataacagggtagccgactcgctctgggttcccgacacctacttcctcaacgat
aaaaagtcctttgtccacggcgtcacggtcaagaacagaatgatccgactgcatccggac
ggcaccgttctctatggactccggatcacaaccacagcagcctgtatgatggatctgagg
cggtatcctctggacgaacagaactgcacactggagatcgagagctatggctacaccact
gatgacattgagttctactggcgagggggagatggagctgtgtctggggtggagagaata
gagctgcctcagttctccatcgtggactacaagctggtctccaagaacgtggtcttctct
acaggttcctatccccgtctgtctctgagcttcaagctgaagaggaacatcggctacttt
atccttcagacctacatgccctctatcctgatcaccatcctgtcttgggtctccttctgg
atcaactatgatgcctccgctgccagagtggctctgggtatcaccacggtgttgaccatg
accaccatcaacacccatctgagagagacgctccctaagatcccctacgtcaaggccata
gacatgtacctgatgggctgcttcgtgttcgtcttcctggccctgctggagtacgccttc
gtcaactacatcttcttcggacgggggccccagaggcagaagagggccgctgagaaacta
gccgtcgtcaacaacgagaaactccgacccgaccccaataagtggatggtgggaaatgta
gttcagagagatgatgctctgtatgccagaatgaaacagagggaaattgacgcgtatgac
acgatgtgggatcccatctttgtggacgatgccgcattaggactaggcgagcaaagaaat
aagatgaccgcctccctgactgatgacaacatcctgtttggttccctggagatgaagaat
gagatggggggtgttccttctgagctgtccaggtccctgggccctgggggtcttggtgat
ccccgcaacaccatgctggcctacgacagctccacactgcagtaccgtagggccgccatg
gcccgccagaactacggcggcggacctcacagcgccctggagcgccacgccacccagaag
aagtcccgcctacggagacgggcctcgcagctcaaggtcaacatccctgacctggctgat
gtgaactctatcgacaagtggtccaggatgatcttccctaccgtgttctccttctttaac
gtgatctactggctctactacgctcactaa
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