Oncorhynchus keta (chum salmon): 118376338
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Entry
118376338 CDS
T09424
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
oke04261
Adrenergic signaling in cardiomyocytes
oke04382
Cornified envelope formation
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118376338
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118376338
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
118376338
09158 Development and regeneration
04382 Cornified envelope formation
118376338
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118376338
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118376338
03036 Chromosome and associated proteins [BR:
oke03036
]
118376338
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118376338
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118376338
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118376338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_Gbeta
Y_phosphatase2
DSE1_N
Motif
Other DBs
NCBI-GeneID:
118376338
NCBI-ProteinID:
XP_052363926
LinkDB
All DBs
Position
4:47837987..47860478
Genome browser
AA seq
481 aa
AA seq
DB search
MVIEWETRPAMTPQDTSTQLPTAPQSRDMDSAGTLHGAGISAWTNSATAVHFRRVGDVCR
SADIISTVEFNHTGELLATGDKGGRVVIFQREPECKTEPYSQGEYNVYSTFQSHEPEFDY
LKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKVSERDKRPEGYNLKDEEGRIKDL
STVTSLQVPVLKPMDLMVEVSPRRVFANAHTYHVNSISVNSDHETYMSADDLRINLWHLG
ITDRSFNIVDIKPVNMEDLTEVITAAEFHPHHCNLLVYSSSKGTLRLCDMREAALCDKHS
KLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYLLTRDYLTAKVWDLNMENKPLEIYQVH
DYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESS
KPRAVLKPRRVCQGGKRRKDDISVDSLDFTKKILHTAWHPTENIIAIAATNNLYIFQDKF
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtaattgaatgggagaccaggcctgctatgacaccacaggacacatccactcagctt
cccactgcgccacagagccgtgatatggactctgcagggactctgcacggggcgggaatc
tctgcttggaccaacagtgctactgcggtgcacttccgtagggtcggtgatgtgtgtcgc
agtgctgatatcatctccactgtagagttcaaccacactggagaactcctggccacaggg
gataagggggggcgagtggtcatcttccagagggaacctgagtgtaagacagagccgtac
tcccagggagagtataatgtctacagcacattccagagccacgagccggagtttgattac
cttaagagtctggagatcgaggagaagatcaacaagatacgatggctgcctcagcagaac
gccgcccacttcctcctttccaccaatgataagaccattaagctatggaaggtgagtgag
cgggacaagaggcctgaaggctacaacctgaaggatgaggagggcaggataaaggacctc
tccactgtcacctcactacaggtgccggtgttgaagcccatggatctgatggtggaggtg
agtcctcggcgtgtgtttgccaacgcccacacctaccacgtcaactccatctccgtcaac
tccgaccacgagacctacatgtcagctgacgacctgaggatcaacctttggcatctgggc
atcactgaccgcagcttcaacattgtggacattaagccagtgaacatggaggatctgaca
gaggtgataacagcagcagagttccaccctcaccactgtaacctgttggtctatagcagc
agtaagggaactctacggctctgtgacatgagagaggccgcactgtgtgacaaacactcc
aaactgtttgaggagccggaggaccccagtaaccgctctttcttctctgaaatcatctcg
tctgtgtcggacgtgaagttcagccacagcgggcgctacctgctgaccagagactacctc
accgccaaggtgtgggacctcaacatggagaacaagcccctggagatatatcaagtgcat
gattacctccgcagcaagctgtgctccctttatgagaacgactgcatctttgacaagttt
gagtgtgcctggaacggctcagacagtgtgatcatgacgggggcctacaacaacttcttc
cggatgtttgaccggaacacaaagcgtgacgtgaccctggaggcgtccagggagagcagt
aagccccgggccgttctcaagcctcgccgcgtctgccagggtgggaaacgtcgcaaggat
gacatcagcgtggacagcctggacttcaccaagaagatcctgcacacggcctggcacccc
acggagaacatcatcgccatcgctgccaccaacaacctgtacatcttccaggacaaattc
aactag
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