Oncorhynchus keta (chum salmon): 118376361
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Entry
118376361 CDS
T09424
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oke04030
]
118376361
G protein-coupled receptors [BR:
oke04030
]
Rhodopsin family
Vision
Opsin
118376361
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
118376361
NCBI-ProteinID:
XP_035618967
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All DBs
Position
21:37065781..37073391
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AA seq
343 aa
AA seq
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MMQLPASLLNASSYLGPSPEGKELLPRAGFITLSIVMAMFTVPAIVLNSTVIVVSLMNKQ
LRQPLNYALVNMAVADLGTALTGGVLSVVNNALGYFSLGRTGCIIEGFSVALFGITSLCT
VALIAIERMFVVSKPLGPISFQTKHAVGGVALSWVWSLLWNTPPLFGWGRYELEGVGTSC
APDWHNRDPNNVSYILCYFLLCFAVPFLIIVASYSKLIYTLRQVSAMGCIEGGAAAKAEA
KVARMVVLMVVTFLVSWLPYATLALVVVSHPDAPISPLLGTVPVYLAKSSTVYNPLIYLY
MNKQFRRYAVPFLLCGRDPWPSEEEGSEMQTTVATINNKVSPS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagctgccagcctctctcctcaacgcttcgtcctacctgggaccgtcccccgag
ggcaaggagctcctgccccgagccggcttcatcaccctctccatcgtcatggctatgttc
accgtaccggccattgtgttgaactccacggtgatcgtggtgtcgctgatgaacaagcag
ctgaggcaacctctgaactacgccctggtcaacatggccgtagctgacctggggacagcg
ctgactggtggggttctgtctgtggtcaacaacgctctggggtacttctccctgggacgg
accggctgtatcatagagggattctctgtggctctgtttggtatcacgtcactgtgcacg
gtagctctgattgccatagagaggatgtttgtggtgagcaagccgctaggaccaatctcg
ttccagaccaagcatgcggttgggggtgtggccttgtcatgggtttggtctctcctctgg
aacaccccgcccctattcggctggggaaggtacgagctggagggcgtggggacatcgtgc
gccccggactggcacaaccgggaccccaataatgtgtcatatatcctgtgctacttcctg
ctgtgtttcgccgtgcccttcctcatcatcgtggcctcttactctaaactcatttacacc
ttaagacaggtctctgcaatgggctgtatagaagggggtgcagcagccaaggcggaggct
aaggtggcccgcatggtggttctgatggtggttactttcctggtcagctggctgccctac
gctaccctggccctcgtggtggtctcccaccctgatgcccccatcagtcctctgctgggc
actgtgccagtctacctggccaagagcagcacagtgtacaaccctctcatctacctctac
atgaacaaacagttccggagatatgcagtgcccttcctgctgtgtgggagggacccatgg
ccatctgaggaggaggggtcagagatgcagaccactgtggcaaccatcaacaacaaagtc
tcccccagttga
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