Oncorhynchus keta (chum salmon): 118376375
Help
Entry
118376375 CDS
T09424
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118376375 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118376375 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118376375 (gars1)
03029 Mitochondrial biogenesis [BR:
oke03029
]
118376375 (gars1)
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
118376375 (gars1)
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
118376375 (gars1)
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118376375 (gars1)
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
118376375 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
Motif
Other DBs
NCBI-GeneID:
118376375
NCBI-ProteinID:
XP_052372169
EnsemblRapid:
ENSOKEG00005033335
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MLRSATSALLRTSIEIRTLRSVPRVCRFLQSLLRCPTQNSSFSLSVCLCKKKKSLWLELS
EGHKMSGNIEEILAPLRLAVKEQGELVRQMKQDGAPDVDVLKAVAELKARKRTLETKELS
LQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFIQ
EEQILEIDCTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKC
PAENKAEMEEVVTQMDNYTQQELTDLFVKYSVKSPTTGNDVSAPHLFNLMFQTSIGPGGN
MTGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEI
EHFVDPTEKFHPKFPNVADLEIILYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFIG
RIYLYLTKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCFDLLC
HARATKVPLVAEKPLKEPKVVDIVQFEPNKGAIGKAYKKDAKLAMEYLAVCDECFITEQE
MLLNSSGEFTIETEGKTFKLTKDMVSVKRFQKTLHVEELVPNVIEPSFGIGRIMYSIFEH
TFQVREGDEQRTFFSFPTTVAPYKCSVLPLSQNQEFMPFVKELSEAMTKQGVSHKVDDSS
GSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPGIIRDLAN
GVMTWAEVESKYPIFEGQETSKKDTAEE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtagcgcaacatcagcactgctgaggaccagcattgagattcgcactcttcgc
tcggtgccgagggtctgccggtttctacagtcgctgctgcgctgtccgacccaaaacagc
tcgttttctctctcggtctgcttgtgtaagaaaaagaaaagtctttggctggagctttcc
gaaggacacaaaatgagtggcaatattgaagaaatcctcgccccactgaggctggcagtg
aaagaacagggtgagctggtgcgccagatgaaacaggatggtgcccctgatgttgacgtc
cttaaagctgtggctgaactgaaagctaggaagagaactctggaaactaaggaactgtct
ctgcagcccaaagatgacattgttgacagaaccaagatggaggatacgttgaagaggaga
ttcttctatgaccaggccttcgctatctatggaggtgtgagtggtctgtatgactttggc
cctgtgggctgtgccctgaagaacaacatcttgcaggcctggaggcagcacttcatccag
gaggagcagatcctggagatcgactgcaccatgctcacccccgagcctgttctcaagacg
tctggacacgtggacaagtttgcggactacatggtgaaagacgtgaagaacggagagtgt
ttcagggcagaccacctcctcaaagctcacctccagaagctgatgtctgataagaagtgt
cctgcagagaataaggccgagatggaggaagtggtcactcagatggacaactacactcaa
caggagttgactgacctctttgtgaaatacagtgtcaagtcccccaccacaggaaatgac
gtttcagcccctcacctcttcaacctgatgttccagacgtctatcggaccagggggaaac
atgacaggctacttgaggcctgaaacggctcagggaatcttcctcaacttcaagcgtctg
ttggaattcaaccagggaaagcttcccttcgcggctgctcagatcggcaactccttcagg
aacgagatctcacctcgctcaggactcatccgtgtcagagagttcaccatggctgagatt
gagcactttgtggacccgactgagaagttccaccccaagttccctaacgtggctgacctg
gagatcatcctgtactcctccaaggcccagaccagtggccagtctgctcacatcatgagg
ctgggggatgctgtggagcagggggtgatcaataactccgtcctgggatatttcatcggg
agaatctacctctacctcactaaagtgggtgtggccaaagacaagcttcgcttccgtcag
cacatggacaacgagatggcccactacgcctgtgactgctgggacgcagagaccaaaaca
tcctacggctggatcgagatagtgggctgtgcggaccgctcctgtttcgacctgctgtgc
cacgcccgggctaccaaggtccctctagtggccgagaagcctcttaaagaacccaaagta
gtcgatatcgtccagtttgagcccaataagggagccatcggtaaagcctataagaaggac
gccaaactagcgatggagtacctagctgtctgtgacgagtgtttcatcactgaacaggag
atgctgctcaacagcagcggggagttcaccatagagacggagggaaagacttttaaactc
accaaggacatggtcagtgtgaagcggtttcagaagaccctgcatgtggaggagctggtc
cctaatgtcatcgaaccctcctttgggatcggtagaatcatgtactccatcttcgagcac
acattccaagtcagagagggagacgaacagagaacgttcttcagcttccctaccactgta
gctccatataaatgctccgtccttcctttgagccaaaaccaggaattcatgccttttgtt
aaggaactctctgaagcgatgaccaaacagggcgtgtcccacaaggtggacgactcgtca
ggatccattgggcggcgctacgccagaacagacgagatcggagtggcgttcggcatcacc
atcgactttgacacggtgaacaagacgccccacaccgccactctgagggaccgcgactcc
atgaggcagatcagggccgaggttagtgagttgccaggaatcatccgtgatctggcaaac
ggtgtcatgacttgggccgaggtggagagcaagtaccccatctttgagggacaggagacc
agcaagaaggacactgccgaggaatga
DBGET
integrated database retrieval system
