Oncorhynchus keta (chum salmon): 118376429
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Entry
118376429 CDS
T09424
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118376429
Membrane trafficking [BR:
oke04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
118376429
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
LRR_LRWD1
LRR_6
Cupin_1
V-set
LRR_9
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
118376429
NCBI-ProteinID:
XP_035619034
LinkDB
All DBs
Position
26:29846553..29892682
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AA seq
606 aa
AA seq
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MAAVPGLGWPGLLLLLLTTLPSTQSQGCPQRCECMAKLKSVACQGKRLSAFPDGISSDTR
LLDLSGNRLRWVEHGDLLSFPRLEELDLSENIITVLEPNAFSSLQSLRVLSLRGNQLKLV
PMGAFSRLTNLTTLDLSGNKIVILLDFTFQDLKSLRNLEVGDNDLVYISNKAFLGLVGLR
ELTIERCNLTSISSQSLSYLRSLVTLRLRYLSISSLEDQNFRKLGGLRGLEIDHWPFLEH
ISPHSLQGLNLSWLSITNTNITSVPTAALRSLPHLISLNLSYNPISVLESWALRDLVRLK
ELHLVNTNLMMVQPYALGGLRQIHLLNLSTNALVTLEEGAFQSVNTLETLRVDGNPLSCD
CRLLWILQRRKTLNFEGKSPVCAGPMEVQGRALSAFSDSALFDHFTCQKPKIRNRKLQPV
TAREGQVVSFVCRAEGEPTPIIFWVSPQRRRITTKSTGRVTVLPEGTLEIRYAQLTDTGT
YICIASNAGGNATYFATLTVSSLPLDAALMANRTYYTGDLNETNLNDTKVFLKFTLDLKT
ILISTAMGCCLFLGVVVFCFLMLFAWSQGRGQHKNNFSVEYSFRKVDGPAASGGQGGARK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgttccaggcctggggtggcctggcctgctactgttgctgctgactactctg
ccctccactcagagccaaggctgtccccagcgctgtgagtgcatggccaagctcaagtct
gtggcatgccagggcaagcgtctgtctgccttccccgacggcatctcctcggacacacgt
ctgctggacctgagtgggaacaggcttcgctgggtggagcatggcgacctcctctccttc
cctcggctggaggagctggacctgagtgagaacatcatcaccgtcctggaacccaacgct
ttctccagcctgcagagcctgagggtgctgtcgctgaggggtaatcagctcaaactggtc
cccatgggtgccttctcacgcctcaccaacctcaccacactggacctgagcgggaacaag
attgtcatcctgttggacttcaccttccaggacctgaaaagcctgaggaacctggaggtt
ggtgataacgacctggtctacatctccaacaaggccttcctgggcctggtgggtctgagg
gagctcaccattgagaggtgtaacctgacctccatctccagccagtctctgtcctacctc
cgcagcctggtcactctgcgcctgcgctacctcagcatctcctccctggaggaccagaac
ttccgtaaactgggcgggctgcgggggctggagatcgaccactggcctttcctggagcac
atctccccccacagcctccagggccttaacctgtcctggctgtcgatcaccaacaccaac
atcacctccgtgcccacggctgccctgcgcagcctgccccacctcatcagcctcaatctc
tcatacaaccccatctctgtgctggagtcctgggccctgagggacttggtccgtctaaag
gagctgcacctggtcaacaccaacttgatgatggtgcagccgtatgccctcggcggcctt
cggcagatccacctgctcaacctatccactaacgccctggtaaccctggaggagggtgcc
ttccagtccgtcaataccctggagacgctgcgtgtggatgggaaccctctgtcctgtgac
tgccgactgctctggatcctccagcgcaggaagaccctcaactttgaagggaagtcccca
gtgtgtgcaggccccatggaggtgcagggcagggccctcagcgcattctcagactctgcc
ctcttcgaccactttacctgccagaagcccaagatacgcaacaggaagctgcagccagtg
actgccagggagggccaggtggtgtcttttgtgtgccgggcggagggtgagcccacacct
atcatcttctgggtatctccccagcgccgccggatcactaccaagagtactggacgtgtc
accgtcctacccgagggaacgctggagattcgctacgcccagctgaccgacaccggcacc
tacatctgcattgccagcaacgccgggggcaatgccacctactttgccacgctgaccgtg
agttcactgcctctggacgctgcactcatggccaaccgcacatactacacaggtgacctc
aacgagaccaatctgaacgacaccaaggtcttcctcaagttcaccttggacctcaagaca
atcctgatatccacagccatggggtgttgcttgttccttggcgtggtggttttctgtttc
ctgatgctgttcgcatggagccagggccggggacagcacaagaataacttctcagttgag
tactctttcagaaaggtggacggccctgcagccagcggcggacaaggaggggcccgcaag
ttcaacatgaagatgatttga
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