Oncorhynchus keta (chum salmon): 118376447
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Entry
118376447 CDS
T09424
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118376447
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
Other
118376447
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
DUF1461
Motif
Other DBs
NCBI-GeneID:
118376447
NCBI-ProteinID:
XP_052381466
LinkDB
All DBs
Position
1:42990826..43192379
Genome browser
AA seq
2141 aa
AA seq
DB search
MTVPVMGGYGRRDQISVRSSELASLGLGLERSPVSIVTTPARSLAWPNAAPRTRRDCTTF
LRNIPAIYGMWLVTLFLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNEYFCTAENQAGK
IRSPSIHVKAVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWEKDTVSMVPG
NRFFLTSFGALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDS
FQSGEVQVGRNVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTVSDLRLDDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTLSWYRN
TEPVLPDQHFSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVVPGEPFSLMCAAKGAPPPTITWTLDDEAVARDPSRVRASQYTLSDGSTVSHV
NVSSPEIRDGGVYRCAARNSAGSAEYQARINVRGSPRIRDMRNITAVAGRNTFINCRVIG
YPYYSIKWYKEGLLLPDNHRQVVYENGTLKLSDVQKVLDEGAYLCSVLIQPQIFISQTVY
VQVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIHITWRKDGQEVAPSSGVNIETKEY
MSSLQIGKVSLKHNGNYTCIASNDAATVSSERQLTVTVPPQFVVQPNNQDGIYGKAGVLN
CSVDGYPPPKVMWKHAKGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEEDRGYYLCQAS
NGVGSDISKSMVLTVKIPAMITSHPNTTMAIKGQIKELNCTARGEWPIIIRWERGDTVID
PDRNPRYAITTSPNEKSDEVLSTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKTDPWELKHATRKISPTNNQAN
IVDLHPAQIYSIRMFSYNKIGHSQASKELTISTEEAQPDGPPVEVFLLPMTSQSIRVTWK
APRKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRV
VFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTRE
DHPGPPAGIKAVPSSTSSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPAPSEYEANPELL
FYRVTHLNRGQQYLIWAAAVTTAGRGNISDKVTVEPAGKAPAKILSFGGTVTTPWMKEVR
LPCSSVGEPTPTIKWTKDSEDTAIPVTLDGQRLIMANGTLVLRSVKAEDSGYYTCTATNM
LGFDTIIVNLLVQVPPDQPRLTVSTTSSTSITLAWIPGDNGGSSIRGFVLQYSVDNIEGW
RDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDHPVF
THVNSTHARLNLQGWASGGCPITAVLLEFRPKGNWAWQNVRTNATADVFLAELREATWYE
LKMKACNSAGCGNQSSHFATLDYDGTGTIPPIKSARPEGDDVKKLFSIGCPVILVTLVVA
LLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPRLHIDIPRVQLLI
EDKEGIKQIGEDKATIPVTDTEFSQNVNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGT
NPVSRKSVKSTHSTRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSAS
LSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTT
GTNDNADSMTSMSTPSETGLCRFTASPPKPQEYDRGRPTNVAVPIPHRANKSEWTGKSDY
CNLPLYMKTDPFFRKQSELRDPCPVVPPREASIRSLAQRAYHTQGRHMTLDSSKQQQALT
VGHAGLAGLSASGGASGGGGSVGGVTGGPSGGSSTSSLPQRTLTMPGSSSSSAQSTAAAT
DAAAGGDSRDPLLESSSSGPGRLERQKQAAGGAYSKSYTLV
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccggttatgggagggtacgggaggcgggaccagatcagtgtccgttcctcg
gagcttgcgagtctgggactcgggctggagagatcgccggtgagcatcgtcaccactcca
gcacggagcctcgcttggccgaacgctgcgccgcgcactcgtcgggattgcacaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttattcctgctgtactct
ttacaagaagtgaacagtgaggatgtggtctcgacgcggctgtactttgtaaacgcctcc
ctgcagcgggtgaccttctccagctcggtcggggtgtccctgccctgccccgcgggcggc
gcaccccatgccgtcctgcgctggtacctggccaccggcgacgacatctacgacgtgccc
cacatccgccacgtgcacgccaacggcaccctccagctctaccctttctcgccatccgcc
tttaacagctacatccatgacaacgaatacttctgcaccgcagagaaccaggctggcaag
atccgcagccccagcatccacgtcaaagcagtgttcagggagccctatacggtgcgggtg
gcagaccagcgctccatgcggggcaacgtggccgtgttcaagtgcctcattcccaccgca
gtgcaggagtacgtcagcgtggtgtcctgggagaaagacaccgtctccatggtgccaggg
aaccgtttcttcctgacgtcgttcggggccctgtacatatcagaggtccagaaggaagat
gccctgtccacctaccgctgcatcaccaagcacaaatacagtggagagactcgccagagc
aatggagccaggctgtctgttatggaccctacggagtccaccccctcagtgttggacagt
ttccagtccggcgaggtccaagtgggacgtaatgtggagctgccctgcatcgcctcgggc
taccccaaccccaccatccgctggctgaaggacgggcgcccgctgcccgccgactcccgc
tggacgcgccgcctcacgggcctgacggtcagcgacctgcgtctggacgacagcggcaac
tacatctgtgaggtcaccaacagcttcggctccaaagaggtgaccggtcacctcaacgtc
atcgagccgttgagagtgactctgtctcccaagaacctgaagacgggcatcagcagcacg
gtgatcctgtcgtgtgctgtgcagggttctccccacttcaccctgtcctggtaccgcaac
acagaacccgtcctccccgaccagcacttctccatccagggggcccacaacgagaccttg
ttcatctccgctgcccagaagagacattcgggagcctaccagtgcttcgccacccgcaag
ggccagactgcacaggacttctccatcatactgctggaggatggtacgccccgtatcgtg
tcctccttcagtgagcgtgtggtggtcccgggggaacccttctccctcatgtgcgctgcc
aaaggtgcccctccccccaccatcacctggaccctggatgacgaggctgtggccagggac
ccgtcccgggtgagggccagccagtacacgctgtcggacggctccaccgtgtcccacgtc
aacgtcagcagcccggagatccgcgacggaggggtgtatcgctgcgccgcacgcaactcg
gccggtagcgccgagtaccaagcgcgcataaacgtaagaggttctcccaggatcagggat
atgcgtaacatcacggcggtggctgggaggaacacctttataaactgccgcgtgattggc
tatccctactactcaatcaagtggtacaaggagggacttctgctgcccgacaaccatcgt
caggtggtgtatgagaatggtactctgaagctaagtgacgttcagaaggtcttggacgag
ggggcgtacctctgcagcgtgctcatccaaccacagatcttcatcagccagaccgtctac
gtccaggtcaaagtgccccctctgatccaaccctttgacttcccccccacctccattggg
aagctcatgtacatcgcctgcgtggtgtcgtctggcgacatgcccatccacatcacctgg
cgtaaggacggccaggaggttgcgccctcatccggcgtcaacatcgagaccaaggagtac
atgagctcgctgcagattggcaaggtgtcgctcaagcacaacggcaactacacctgcatc
gctagcaacgacgccgccaccgtcagctctgagaggcagctcactgtcacagtgcctcct
cagtttgtggtccagcccaataaccaggacgggatctatggcaaggcgggggtcctcaac
tgctccgtggacggatacccgcctcccaaagtcatgtggaagcacgccaaaggtataggg
aacccccagcagtaccacccagtgcctctgaccggtcggatacagatcatggggaacggc
tccctgctgattcgtcacgtcctggaggaggaccggggctactacctctgtcaggcctcc
aacggcgtgggctccgacatcagcaagagcatggtcctgacggtcaagatcccggcaatg
atcacgtcgcaccccaacaccaccatggccattaagggccagattaaggagctgaactgc
acagcgaggggggaatggcctatcatcatccgttgggagcgcggtgacacggtcatcgac
cccgaccgtaaccctcgctacgccatcaccaccagccccaacgagaagagtgacgaagta
ttgtctacgctgaagctgaaaccagcagagcgaggtgactcggtcttcttctcctgccat
gccatcaactcatatggagagggccggggcctcatccagctcactgtgcaagagccccca
gaccctccagagttggaggtgagggaggtgaaggatcggagtatgaacctgcgctggacc
cagagatttgacggcaacagcatcatcaccagctacgacattgagtacaagaacaagacc
gatccttgggagttgaagcatgccacccgtaagatctcccccaccaataaccaggccaac
atcgtggatctacaccctgcccaaatctacagcatccgcatgttctcctacaacaagatc
ggacacagtcaagccagcaaggagctcaccatcagcacagaggaagcacagccggatggt
cctcctgtggaggttttcctcctgcctatgacctcgcagagcatccgcgtcacctggaag
gcccccaggaaggagcttcagaacggggtgatccggggctaccagatcggttaccgtgag
aacgggccgggcagtaacggccagtacagcatcgtggagatgaaggccacgggggacagc
gaggtgtacaccctggacaacctgaagaagtttgcccagtatggagtggtggtccaggcc
ttcaacagggccggcaccggcccttccagctctgagatcaacgctaccacactggaagat
gtgcccagtcagccgccccagaacgtgcgggccatctcggtgacatcagacgaggcggta
atcacgtgggcggagcccccgcgtctgacgctgcacggcgtgctgaagggctatcgggtg
gtcttctggtccctcttccccgacggagagtggggagagatgcagaacatcacgacaacc
cgggagcaggtggagctgagagggctggagaagttcactaactacagtgtgcaggtgctg
gcctacacccaggctggggacggggtcaggagcaatgtcctgtacatccagacccgcgag
gaccaccctggccccccggctggcatcaaagctgtgccctcttccaccagcagtgtggtg
gtttcctggctacccccgcacaagcccaatggaataatccgcaagtacaccatctactgc
tccagccccggatcaggccaaccggctcccagtgagtacgaggccaaccccgagctgctg
ttctaccgggtcacccacctgaaccgcggacagcagtacctcatctgggccgccgccgtc
accaccgccggacgggggaacatcagcgacaaggtcactgtggagcctgctgggaaggca
ccagctaagatcctatcgttcggaggtacggtgaccactccctggatgaaggaggtgagg
ctaccctgcagctcagtgggcgaacccacccccaccataaaatggaccaaagacagtgag
gacacagccatcccggtaactctggacggtcagaggctcatcatggccaatggcacgctg
gtcctgcgctcggtgaaagctgaggattctgggtactacacgtgcacggccaccaacatg
ctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccggaccagccccgt
ctgactgtctccaccacctcctccacctctatcaccctggcctggatccccggggacaac
ggaggatcctccatcagaggtttcgtgctgcagtactcggtggacaacatagaggggtgg
agggatgtgttcatcagttccagtgagaggtccttcaagctggacaacctgcgctgtggc
acctggtacaaggtcaaactggccgccaagaacagcgtgggagcgggacgcatcagtgaa
atcatcgaggctaagacccacggacgagagccccagttcaataaggaccatccggtgttc
acccacgtcaactctacccacgcccggctcaacctgcagggctgggcgagcggtggctgc
cccatcacggccgtgctgctggagttcagacctaagggcaactgggcgtggcagaacgtt
cgcaccaacgccacggccgacgtgttcctggctgagctccgcgaggccacctggtacgag
ctgaagatgaaggcgtgtaacagcgccggctgcgggaaccagagctctcatttcgccacg
ctggactacgacggcacaggtaccatccctcccatcaagtcagcgcggcccgaaggcgac
gacgttaagaagctcttctccattggctgccccgtcatcctggtcactctggtcgtcgcc
ctgctcttcatcatccgcaagaaacgcaaagagaagagactgaagagactgagagatgcc
aaaagcctggctgagatgctgatcagcagtaagaataaccggagctttgacacccctgtg
aaggggcccccccagggcccccgtctccacatcgacatccccagagtccagctgctcatc
gaggacaaggaaggcatcaagcagatcggtgaagacaaagccaccatcccagtgacggac
acagagttcagccagaacgtgaatccccagagcttctgtacgggcgtgtctgtgcatcac
cccgccctcatccagaacaccggccctctgattgacatgtccgacatcagaccagggaca
aacccggtgtcgaggaagagcgtgaagtcgacccacagtacgaggaaccgctactccagc
cagtggaccctgaccaagtgccagtcgtccacgcccgcccgtaccctcacctccgactgg
cgcaccgtgggctcccagcatggcatcaccgtcaccgagagcgacagctacagcgccagc
ctctcacaggacacggataaagggcgtaacagcatggtgtccacagagagcgcgtcctcc
acctatgaggagctggcgcgggcctacgaacacgccaagcttgaggagcacctgcagcac
gccaagtttgagatcacagagtgcttcatctccgacagttcctcagaccagatgaccacg
ggcaccaacgacaacgccgacagcatgacctccatgagcacgccgtccgaaacaggcctg
tgtcgcttcaccgcctcgccacccaaaccccaggaatacgaccgcggcagacctaccaac
gttgccgtgcccatcccccaccgcgccaacaagagcgagtggactggcaaaagtgactac
tgtaaccttcccctctacatgaagacagaccctttcttccggaagcagtcggagctgcgt
gacccgtgcccggtggtgccgccccgcgaggcctccatccgcagcctggcccagcgggcg
taccacacccagggccgccacatgactctggactcctccaagcagcagcaggctctgact
gtgggccacgcaggcctggccggcctcagcgcctcagggggagcatcagggggtggcggt
agtgtaggaggggtgactggagggccgtctggtggttccagcacctcctccctgccccag
aggactctcaccatgcccggctcctcctcttcctctgcgcagagcactgcagccgctacc
gacgcagccgcgggaggagactctagagaccctctgctggagagcagctcgtcaggcccg
ggcagactagagagacagaagcaggcggctggcggggcctactccaaatcgtatacactg
gtgtag
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