Oncorhynchus keta (chum salmon): 118376550
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Entry
118376550 CDS
T09424
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118376550
Membrane trafficking [BR:
oke04131
]
Protein recycling
Others
Others
118376550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF6786
InlK_D3
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
118376550
NCBI-ProteinID:
XP_052315305
LinkDB
All DBs
Position
13:11177226..11685071
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AA seq
1150 aa
AA seq
DB search
MSAIMARNMVPLRPKGTVSAHLCRAVFIASAWMSLMGPVRCDSRSDADRMLDSGGGIGID
RRDGMFGQDLGDNGMDMESRRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHWTGENSSV
ILILTKYYHVDSSKVLESSLWRSSDYGTTYTKLNLMPGTTIVVSNFYICPTNKKKVILVS
SSINERDQLLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYVSMDLGRK
WTLMQERVTKDRIFWSVAGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKTVTAQFLGK
IDHNSLSVQDDYIFVKVTTGNRTKHYVSYQRNEFVQMSFPKYALPKDVHIVSTDESQVFL
ALQEWYQTDSYNLYQSDPQGVYYSVVLENVRSAKQPEESVVIDILEVRGIKGVFLANQKV
DGKVRTLITYNKGRDWEPLAPPTTDMNGKPVNCKSPDCHLHLHLRWADNPYVSGTVHTKD
SAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSI
PLKILKFSIDEGRTWTIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDF
RQSFPRQCTEGDYDSWKLTDLQGEKCIMGQERSFRKRKDTAFCIKGRSYTSALTTKPCQC
SEKDFNCDYGFERAQSLKTEGDRCFADFWHDPDSPPDDCHQGHNFESSTGYRKVVSNLCE
GGVNKQQSAKQHTCPLLPPRGLQLGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLG
DGMRAIYQNLTVTDEPIQHRYEQQGVYRVTVKAENVAGHDQATIYIQVTAPLQEVHLEVV
PIAGINQEVNLTAVVHPFEANLTVFYWWIGDNLQPKMSLGNSLITRFPEEGEVSVTVQAS
NGRSMVQDTNNVHVYDRFQVIPLAFSSNLDRLNPNIPEWREDVGQVVTRILSKITGIPQV
SLVTMVKRGLPTTADLYVLPPESQRDKRSVFVDKRIPAIKQAFNDNNVSFIVRGGLQVLV
TLADPNAGSQGGMAGPGVWALSVIFLISLLATGSFILYKFKSPWLRTEDAYPPLFFRKLP
GRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNAEGNHSGVVLSIN
SRELHSYLTS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctataatggcgcgaaacatggtacctctgcgtccgaaaggaacagtttcagcg
cacctgtgccgggctgtgtttatcgcctcggcttggatgtcactgatgggacccgtgcga
tgtgacagccggagcgacgcggatcgtatgcttgacagcggtggcggtataggcatagac
aggagagacggaatgttcggacaggacttgggtgataatggtatggacatggaatcccgg
cgcttcaggagagctctatcccaagagaaagtgtccctgctcagcagctcgttcgtgctc
aaaggggatgccactcacaaccaggcgatggttcactggacgggggagaacagcagcgtc
attctcatcctgaccaagtattaccacgtcgactccagcaaggtcctagagagctccctc
tggagatccagtgactatggcaccacctacacaaagctcaacctgatgcctggtacaacc
atcgtggtctctaacttctatatctgccccaccaacaagaaaaaggtgatcctggtgagt
tcgtccattaacgagcgggaccagttgctgttcatcagtacagacgagggctcctctttc
cagcgccagcccctctccttcactgctgagaccctcctcttccaccctaaggaggaggac
aaggtgctggcttactgcaaggagggcaagctctacgtgtccatggatttgggccggaag
tggactctaatgcaggaacgagtaaccaaggacagaatattctggtctgtggctggtgta
gatgtggaccctgacctggtgcatatggagatgcaggacacaagtggagggtacctgtat
gtaacctgtctgatccagaactgctcagacaagaccgtaacggctcagttcctggggaag
attgaccacaactctctctcagtccaggacgactacatatttgtcaaggtgaccacagga
aaccgcaccaagcactacgtctcataccaacggaacgagtttgtccagatgagtttccct
aaatacgccctaccaaaggacgtccacatagtgagtacggatgagagccaggtgttcctg
gccctgcaggagtggtaccagacagacagctacaacctgtaccagtcggacccgcagggt
gtttactactccgtcgtgctggagaacgtccgcagtgccaagcagccggaggagagcgtc
gttatagacatactggaggtgcgcgggatcaagggggtcttcctggccaatcagaaggtg
gatggcaaagtgcggactctcatcacctataacaaaggcagagactgggaaccgctagct
ccgcctactactgacatgaatggcaaaccggtcaactgcaaatcacctgactgtcacctc
cacctccacctgcgctgggctgacaacccctacgtatcagggaccgttcacaccaaagac
tccgcccccggactcatcatgggcgcaggtaacttgggatcccagctggtggagtataaa
gaagagatgtacatcacctctgactgtgggaagacctggagacaggtgtttgaggaggag
catcacatcctgtacctggaccatggaggggtcatcgttgccatcaaagacacctccatc
cctctcaaaatactcaagttcagtattgatgagggacgcacctggaccatccacaacttc
acaagcacctcagtgttcgtggacggacttttgagcgagccgggagatgagacgttggtc
atgacggtgttcggtcacatcagctatcggtcagactgggagctggtcaaggtggacttc
agacagtcattccccagacaatgtacagagggagactacgactcctggaaactcacagat
ctgcagggagagaagtgcatcatgggtcaggagaggagtttcaggaagaggaaggacact
gcgttctgtatcaaggggaggagctacacctccgccctgactaccaagccctgccagtgc
tccgagaaagacttcaactgtgactatgggtttgaacgagcccagagcctcaaaacagag
ggagatagatgcttcgctgacttctggcacgacccagactcaccgcctgacgactgtcac
cagggacacaactttgagtccagtactgggtacaggaaggttgtgtccaacttgtgtgaa
gggggagtgaacaagcagcagagcgccaagcagcacacctgtcctctgctgccgcccaga
ggcctccagctgggcatcaaaggacagatgctggctgtggcgcctggtgatgacatcacc
ttcattgtccaccaggagcagggtgacaccagcagcactaagtaccaggtggatctgggg
gacgggatgagggccatctaccagaacctgacggtgacagacgaacccatccagcaccgc
tacgaacagcagggagtctaccgcgtcaccgtcaaggctgagaacgttgctggacacgac
caggccaccatatatatccaggtcacagcccctctacaggaagttcacctagaagtagtt
cccatcgccgggattaaccaggaagtcaacctgacagctgtggtgcatccctttgaggcc
aacctgactgtcttctactggtggataggagacaacctgcagcccaagatgtccctgggg
aacagtctgataacgaggttccctgaggaaggagaggtgtctgtcaccgtccaggcctct
aacggacgctccatggtgcaggacaccaacaacgtccacgtctacgaccgtttccaggtc
atcccccttgccttcagcagtaacctggaccgcctcaaccccaacattccagagtggagg
gaggacgtgggtcaggtggtcaccaggatattgtcaaagatcacaggtatcccccaggtg
tccctggtaaccatggtgaagcggggcctgcccactacagctgacctgtacgttctccca
ccagagagccagcgtgataagaggagcgtgtttgtggataagcgtatccctgccatcaag
caggccttcaacgacaacaacgttagcttcattgtacgaggaggtctacaggtgttggtg
acgctagctgacccgaacgcaggttctcagggtggaatggcaggtcctggagtctgggct
ctgtctgtcatcttcctcatcagcctcctcgctactggatccttcatcctctacaagttc
aagagtccttggcttaggactgaggatgcctatcctccgctgtttttcagaaagctgccc
ggccggaatgtgtacgcccagatgcacaatgagaaggagcaggagatgaccagccctgtc
aatcacagtgaggacacgcagcacatcatccagggggaggagtttatcgacgacgacctg
gactcacagactctaggtaacgcagaaggtaaccactcgggcgtggtgctgagcatcaac
tccagagagctgcacagctacctgaccagctga
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