Oncorhynchus keta (chum salmon): 118376574
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Entry
118376574 CDS
T09424
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118376574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118376574
03036 Chromosome and associated proteins [BR:
oke03036
]
118376574
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
118376574
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
118376574
RSF complex
118376574
WICH complex
118376574
B-WICH complex
118376574
NORC complex
118376574
BRF complex
118376574
NuRF complex (fruit fly)
118376574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
118376574
NCBI-ProteinID:
XP_052320743
LinkDB
All DBs
Position
16:complement(14979830..14991047)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSETGNGVELREEQAVELEETGGGEEKDDVSEASKEESSEVGQDAQDEDPSSSTAPAYEE
KVASDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDNR
HRRTEQEEDEELLSESSKTTNVCTRFDESPSFVKGGTMRDYQVRGLNWLISLYENGINGI
LADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIG
DREQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSE
IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVE
RLHTVLRPFLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMD
KMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRV
LIFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEEDSPKFIFMLSTRAG
GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAE
MKLQLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESDITDDDIDEILERGE
KKTMELKEKMNTMGESSLRNFTMESDNSVYTFEGEDYREKKKVVTNWIEPPKRERKANYA
VDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRN
PELPNSAQHQKEEQAKIDEAEGLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRD
DIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDT
KIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQF
RFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKGEGTP
DPRGGRRKKLKL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactggaaacggcgtggagctgcgggaagagcaagcagttgaacttgaagaa
accggaggaggggaggaaaaggatgatgtgtcagaggcaagcaaggaggagtcttctgaa
gtcggacaggatgcccaagatgaggacccctcttcatctacagcgccagcctatgaggag
aaagtggcatcagaccggaccaacagatttgagtacctactgaagcagacagaggtgttt
gcccatttcatccaacctgcggcccagaagacccccacctccccgctcaagatgaagcca
gggcgccctcgtgtcaagaaggacgagaaacagaatctcctctcggtcggagataaccgt
catcgtcgcacagagcaggaagaggatgaagagctgctgagcgaaagcagcaagaccacc
aacgtctgcacccgcttcgacgaatctccctcctttgtaaaagggggtacaatgagagac
taccaggtccgtggtctgaactggctcatctctctgtacgagaacggaatcaatgggatc
cttgctgatgaaatgggtttgggtaagacgctgcagacgatctctctgctaggttacatg
aagcactacaggagcatccccgggccccacatggtgctggtgcccaagtccaccctgtac
aactggatgaacgagttcaaacgttgggtcccctccctcaaagcagtctgcctcatcgga
gaccgagagcagaggaatgccctgatcagagatgtactgctgccaggggagtgggatgtg
tgtgtcacctcttacgagatgctcatcatagagaaggccgtgttcaagaagtttaactgg
aggtacctggtcatcgacgaggcccacaggatcaagaacgagaagtcaaagctgtctgag
atagtgcgtgaattcaagaccaccaaccgtctgctgctaaccggcaccccactgcagaac
aacctccacgagctctgggccctgctcaacttcctgctgccagacgtcttcaactcctca
gaggactttgactcatggtttgacaccaacaactgcctgggggatcagaagttggtggaa
cgtcttcacactgtactgcgtcctttcctgctgcgtcgtatcaaaaatgaggtggagaag
tctctgctgcctaagaaagagatcaagatgtacgtggggctgagtaagatgcagagagaa
tggtacaccaagatcctgatgaaggacatagacatcctgaactctgcagggaagatggac
aagatgcgcctgctcaatgtcttgatgcagctgaggaagtgctgcaaccacccgtacctc
tttgacggggccgagcccggcccgccttacaccaccgacctgcacctggccgtcaatagc
ggcaagatggccgtccttgacaagctgctgcccaagatgaaggctcagggctcccgtgtg
ctgatcttcagccagatgaccaggatgctggacatcttggaggactactgcatgtggcgc
aacttcggctactgtcgcctggacggacagactccccacgaggagagacagatctccatc
aacgcgtacaatgaggaggacagccctaagttcatcttcatgttgagcaccagggccgga
gggctgggtattaacctggccacagctgacgtggtcatcctctacgactcagactggaac
cctcaggtcgacctacaggccatggaccgagctcacaggattggtcaaaagaagcaggtg
cgcgtgttccgtttcatcacggaaaacacagtagaggagaggatcgtggagcgggctgag
atgaagctccaactggactccatcgtcatccagcaaggaaggctagtggatcccaacgcc
aacaagctggggaaggacgagatgctgtctatcatccggcacggcgccacgcacgtcttc
gcctccaaggagagcgacatcaccgacgatgacatcgacgagatcctggagcgaggcgag
aagaagaccatggagttgaaggagaagatgaacaccatgggcgagagctccctgaggaac
ttcaccatggagtccgacaacagtgtgtacaccttcgaaggagaggactacagggagaag
aagaaggtggtcaccaactggatcgagccacccaagagagagaggaaggccaactacgca
gtggatgcctacttcagagaggccctgcgtgtcagcgagcccaaagcacccaaggctcct
cgtccacctaagcagcccaatgtgcaggacttccagttcttccccccaaggctgtttgaa
ctgctggagaaagagatcctattctacaggaagactatcggctacaaggttcctcgtaac
ccagaactgcccaactcggctcagcaccagaaggaggagcaggccaagattgacgaggcc
gagggcctatcagaggaggagctggaggagaaggagaaccttctctcgcagggcttcacc
atctggaataagcgtgactttaaccagttcatcaaagccaatgagaagtgggggagagac
gacatcgagaacatcgccagagaggtggagggcaaaaccccagaggaagtcatggaatat
tccgctgtgttctgggagcgctgcaacgagctgcaggacattgagaagatcatggctcag
atcgagaggggagaggcccgcatccagaggaggatcagcatcaagaaagcactggacaca
aagattggtcgctacaaggcgccgttccaccagttgaggatctcgtacggcaccaacaag
gggaagaactacacggaggaggaggaccgcttcctcatttgcatgctgcacaagctgggc
ttcgaaaaggagtcagtctacgacgagctgcgccagtgcatccgcaactcaccccagttt
cgcttcgactggttcctcaagtccaggaccgccatggagctccagaggcgatgcaacacc
ctgatcaccctgattgaacgagagaacatggagctggaggagagggagaaggcagagaag
aagaagaaaggaccacggagtcagtcttctgctcagaagcgtaagggagaagggacccca
gacccgcgaggaggccgcaggaaaaagttaaagctgtga
DBGET
integrated database retrieval system
