Oncorhynchus keta (chum salmon): 118376623
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Entry
118376623 CDS
T09424
Name
(RefSeq) eukaryotic translation initiation factor 5B-like isoform X1
KO
K03243
translation initiation factor 5B
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
oke03012
]
118376623
Translation factors [BR:
oke03012
]
Eukaryotic type
Initiation factors
eIF-5
118376623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Roc
Sec23_helical
Motif
Other DBs
NCBI-GeneID:
118376623
NCBI-ProteinID:
XP_052345007
LinkDB
All DBs
Position
30:61968598..61992387
Genome browser
AA seq
1249 aa
AA seq
DB search
MGKKQKKSGDDSAKDGGIDLDALAAEIEGAGASKEQGKGKAKKKKDKKKDDFDEDDILKE
LEELSLETTGAKGSKKPDATDEPESAAEPPPPTKAEKKKTRKGKRASLEDDDRDDEEVSG
TGDVEDEDKQKDKKTSASPAAAAAGSDSEDDTSRTRRKPKAGKKGGRKEASDEEEEDDDG
GARKGEGGGEDDSDDDDSVDASQAGKKGKKKKGKAKADSEEEEEEEGTFKMKTAAQKKAE
KKERDRKKKEEDRAKLKKQKEKEEEKEGSIEVAAVPKKEKEVVKKSEPAVAPAAAPTPAA
APTPAAETEAAAEIEDQEGADPQGEAADEVLDAINEEEGGDKKGKKDKKKKKGDKEKEKE
EKKKGPSKATVKAMQEALAHMKEEEERAKKEEEENLRRLEEQEAQRLEQERLEQERKEKK
KQKEKERKERLKKEGKLLTKAQKEARARAEATLELLKAQGIEVPSKDDSVPKKKPVYGDK
RKKKPQQAQTPEEISEVMSPTSETAEPIISPMAVETPEVPAEVEQKAESAVDDWEAIAET
IDQDKELKTVHIEVKPETPKQPQQKPLSQPEEEDDDEDEEEEDDEEEESEEEEKESQPHT
TQQAPATKRKGGKESSESSSDSDSDDDRTKEERIYDKAKKRIEKRRAENIKNINLDKLRS
PVVCVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAIVEQTKMVKNFNNE
AIKIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTLESINLLKEKKCPF
IVALNKIDRLYDWKKSPDTDVVATLKKQKKNTKDEFDERAKAVIVEFAQQGLNAALFHEN
KDPRTFVSLVPTSAHSGDGMGNLIALLVELTQTMLARRLAHCDELRAQVMEVKALPGMGT
TIDVILINGVLREGMTVIVPGVEGPIVTQIRGLLLPPPMKELRVKNQYEKHKEVCTAQGV
KILGKDLEKTLAGLPLLVAHKEDEVAVLRDELVRELKQTLNSIKLEEKGVYVQASTLGSL
EALLEFLRVSKVPYAGINIGPVHKKDVMKASTMLEHDPQYATILAFDVKVERDSQEMADS
LGVRVFSAEIIYHLFDAFTKYREDYKKAKQDEFKHIAVFPTKLKILPQFIFNSRDPIVMG
VNVEAGVLRQGTPLCVPSKGFVDIGIVTSIEINHKMVDSAKKGQEICIKIEPIPGEAPKM
FGRHFEATDILVSKITRASIDALKNWFRDEMGKSDWQLIMELKKTFEII
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagaaaaagtcaggcgatgacagtgccaaagacggtggcatcgacctt
gacgccctagcagcagaaatcgaaggagcgggagcctccaaggagcaaggtaaaggaaag
gccaagaagaagaaagacaaaaagaaagacgattttgatgaagacgacatcctgaaggag
ctggaggaactgtctcttgaaaccacaggagctaaaggcagcaagaaaccagacgccaca
gacgagccggagagtgccgccgagcccccgccgcccaccaaagcagagaagaagaagaca
cggaagggcaagcgagccagcctggaggatgacgacagggacgacgaagaggtttcgggt
acgggtgacgtggaagacgaagacaagcagaaggacaagaagacttctgcttccccagct
gctgctgctgctggctcagactcggaggacgacacctcacggacccggaggaaacccaag
gcagggaagaagggaggccgcaaggaggcctcggacgaggaagaggaggatgacgatgga
ggtgcgaggaaaggagaggggggaggggaggatgattcagatgatgacgactcagtggac
gcatcgcaggctggaaagaaaggcaagaagaagaagggcaaagccaaggcagacagtgaa
gaagaggaagaggaggagggaaccttcaagatgaagacggcagctcagaagaaggcagag
aagaaggagagagaccgcaagaagaaagaggaggacagggcaaagctgaagaagcagaag
gagaaggaggaggagaaagaggggagtattgaggttgcagcagtgcctaagaaagagaaa
gaggtagtgaagaagagtgagccagcggtggccccagcagcagccccaaccccagcagcg
gccccaaccccagcagcagagacggaggcagcagcagagattgaagatcaggaaggggct
gatcctcaaggagaggctgccgatgaggtgcttgatgcaattaatgaagaggaaggggga
gacaagaagggcaagaaagacaagaagaagaagaagggggacaaggagaaggagaaagag
gagaagaagaagggacccagcaaggccacagtgaaggccatgcaggaggctctggctcac
atgaaggaggaagaggagcgcgccaagaaggaggaagaggagaacctgcgtcgcctggaa
gagcaggaggctcagagactggagcaggagcgtctggaacaggagcgcaaggagaagaag
aaacagaaggagaaagagaggaaggagaggctgaagaaggagggcaaactgctgaccaaa
gcccagaaagaggcccgggccagggcagaggccacacttgaactcctgaaggcccagggt
attgaagtgccatccaaagacgactcggtgccaaagaagaagccagtgtacggagataag
aggaaaaagaagccccaacaagcacagacccctgaagagatctcagaggtcatgtcaccc
acgtcggagacggcagagccaatcatctcaccgatggcagtggaaactcccgaagtacca
gcagaggtagagcagaaagctgagtctgcagttgatgactgggaggctattgctgagacc
atcgatcaggacaaagagctgaagacggtccacattgaggtgaagccagagacgccaaag
cagccccaacagaaacccttgtcacagccggaggaagaggacgacgacgaggacgaggag
gaagaggatgatgaagaggaggaaagtgaggaggaggagaaggagagtcagcctcacaca
acgcagcaggccccagccactaagaggaagggagggaaggagagctcagagtccagtagt
gacagcgactccgatgatgatcgcactaaagaggagcggatctacgacaaggccaagaag
cgtattgagaaacggcgagcagagaacataaagaatataaacctggacaagctccgctcc
cccgtcgtctgtgtactgggccacgtagacacaggcaagaccaagatcctggacaagctg
aggcatacacacgtacaggacggagaggcaggagggatcacccaacagatcggagccact
aacgtaccgctggaggccatcgtagagcagaccaagatggtgaagaacttcaacaacgag
gccattaaaatcccaggaatgctgatcatcgacaccccaggccacgagtctttcagtaac
ctgaggaaccggggcagctctctgtgtgacatagccatcctggtggtggacatcatgcac
ggcctggagcctcagaccctggagtccatcaacctgctcaaggagaagaagtgtcccttc
attgtagcacttaacaagattgaccgtctgtacgactggaagaagagtccggacacagac
gtggtggccacactgaagaagcagaagaagaacaccaaggatgagtttgacgagagggcc
aaagctgtcatcgttgagttcgcccagcagggtctgaacgcagccctcttccatgagaac
aaggacccgaggacctttgtgtctctggtgcccacctcggcccactccggggacggcatg
ggcaacctgatcgctctgctggtggagctcacccagaccatgctggcacgacgcctggca
cactgcgacgagctcagggctcaggtcatggaggtgaaagccctgcctggtatgggcacc
actatagacgtgatcctgatcaacggggttctccgggagggcatgaccgtcatcgtcccg
ggggtggagggacccatcgtcacccagatcagggggctgctgctgcctccacccatgaag
gagctcagggtcaagaaccagtatgagaagcataaggaggtgtgtacggcccagggagtg
aagatcctggggaaagacctggagaagaccctggcagggctccccctgctggtggcccac
aaggaggacgaggtggccgtgctcagggatgagctggtgcgggagctgaaacagactctg
aactccatcaagctggaggagaagggtgtgtacgtccaggcctccactctcggatccctg
gaagccttgctcgagttcctacgagtgtccaaagtgccttacgctggcatcaacatcggt
ccagtccacaagaaagacgtgatgaaagcttccactatgctggagcatgacccacagtat
gcaacgatcctggcgtttgatgtgaaggtggagagggactctcaggagatggctgatagt
ctgggggtcagggtgttcagcgctgagatcatctaccacctgtttgatgccttcaccaag
tacagagaggactacaagaaggccaagcaggacgagttcaaacacattgctgtgttcccc
actaagctgaagatcctgcctcagttcatcttcaactctagagaccccatagtcatggga
gtcaacgtggaggctggggtcctcagacagggaaccccactctgtgtgcccagcaagggg
tttgtggacattggcatcgtgaccagcattgagatcaaccacaagatggtggacagtgcc
aagaagggccaggagatctgtataaagatcgaaccgatccccggagaggcacccaagatg
ttcggccgacactttgaggccaccgacatcctcgtcagcaagatcaccagagcgtccatc
gatgccctgaagaactggttcagagacgagatgggcaaatctgactggcagctcatcatg
gagctcaagaagacttttgaaatcatctga
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