Oncorhynchus keta (chum salmon): 118376640
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Entry
118376640 CDS
T09424
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118376640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118376640
03036 Chromosome and associated proteins [BR:
oke03036
]
118376640
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118376640
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118376640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
118376640
NCBI-ProteinID:
XP_052343011
LinkDB
All DBs
Position
30:complement(867049..916729)
Genome browser
AA seq
1727 aa
AA seq
DB search
MSRTSAESTDQMMEEVGQLQITDQMEEEEGGQLQITDQMEEEEDVGQHQITAQMEEEEEE
PGSSAETERPSSSHTKMKPPVTAKHTGGNESDTSDESGQEDGASDNPSDDTTLQERIDCT
ACGQQVNHFQRHSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICC
DYCHNAFCKKCILRNLGRKELSMITDEDSKWSCYICSPQPLSDIASNCSNILTKLESFWR
TGCRKERKEVKGHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVLKELVKRTKKLI
ETTTGLNSTFIQQAEEEQGAGGGGSGTRHLKAIRSVLADMKKAHAALEEDLESQFTSQDQ
GMQNGDAVSNTDGHDQIDNMVEDRQEAEEDKMADTEDGEELEEDGGLSEDAEMEGSPAPA
PQDISDTEMEGSPAPAPQDISDTETDSQAKDQTAVVEEEGDRKKDIVSVGPAVPDELFQM
VESLADSAGLKPGNDTMETTAASQSESPAADSNRKSLETHKEKAMPKVKNLIVKLMPVPV
VTTRISRSMSKDKDGGKEKSKDGGKEKSKDGGKEKSKDGGKEKSKDGGKEKSKDGGKEKS
KDGGKEKSKDGGKEKSKDGGKEKSKEEVEEGEGSEEDSRRSSRTKTTPLRKSPDGKNKMA
ESSPENSDSEGMSLSRLKSRAKGSSEKEREEEEEEQQQSNASSKVTADPSKQEVDSDSDE
VLDILLQTAAAEHSLDEDAQQDADGNQGNRSFKRCLFKLSKKDGEEEENDKVKSDKKLAA
KRKLKADDSDNSESDSDEDAKKKKKKKSPSASAKKTSKKKGSDGSSDSDLEMKGLSKLAT
GKRRSSRVNKEREKENKEREEKEREEEEKENKEREEKEIKGGDRRRSYELKRKARSRGAK
QQDSSSDDEEEEEEGGGSGEESGDQQKIKPIMEETVVAGRGTFHQSSGDEGNHDASQMAN
EEDDDDDAPENRIAKKILAQIKANYSSGAEESSDEDGEENEQKKGKGGEEQEEDDDDEWG
SGSDVDMKTSVGRYHRLLRHKLTLYEVESGEEKEKPASKGKKKKTKRTRRKVGSDDSADS
DFKESASSCESGVSEEISEKELSSEEESESEREGSSQKRTTRSSVKKKEERSYAQKKKRR
RIKTQDSSSDDKSGSGEDGSGKEDGDTPKGQRKKIRKILKYDELRTETRDALNEEEEERR
RRIAEREQLREKLREVLVVEEASAVACPITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQ
VDGDEGNHDASQMADEEDDDDPENRIAKKMLAQIKANYSSGAEESSDEDGEENEQKETKR
TRRKVGSDDSADSDFKESASSSESGVSEEISEKESSSEEESESEKEGSSQKRTTRSSVKK
KKKKEERSYAQKKKRRLIKTQDSSSDDKSGSGEDGSGKEDGDTPKGQRKKIRKILKDDKL
RTETRDALKEEEERRRRIAEREQLKEKLREVLVVEEASAVACPITTKLVLDEDEETKEPM
VQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKTLQVVTLLH
TLLLCKKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESLKVTELAMVKRPQESASAL
QQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEAS
DISKAMNSIKTRRRVLLTGTPLQNDLIECMSITSCYIQTAGLQDIRK
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaacctcagctgaatctacagaccaaatgatggaggaagtaggtcaacttcag
attacagaccagatggaggaggaggagggaggtcaacttcagattacagaccagatggag
gaggaggaggatgtaggtcaacatcagattacagcccagatggaggaggaggaggaggag
cctgggagctcagcagagactgagagaccctcctcttctcacaccaagatgaagcctcct
gttacagccaagcacaccggagggaatgagtctgacacctcggacgagagtggacaggaa
gatggcgcctctgacaacccctcagatgataccactttgcaggagaggatagactgcacc
gcctgtggacagcaggtcaaccacttccagcgccactcggtgtttgagcacccgatgctc
catgtgctcctctgcaagtcgtgttataagtattacaccagcgatgacatcaataaagac
gaggacggcatggacgaacagtgcaggtggtgtgctgaaggtggcaacctgatctgctgt
gactactgccacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaaggag
ctgtccatgatcaccgacgaggacagtaaatggtcctgctatatctgcagccctcagcct
ctctcagacatcgcctccaactgctccaacatcttgaccaagctggagagcttctggcgc
acgggatgcaggaaagagaggaaggaggtgaaagggcacagtaagggtaaaggtcaccac
caccatggtaaagctgtggtgaacggtaaggaacattcagacgggtcagggaccctcacc
ttctcctataagaccctgaaggtcctcaaggagctggtgaagaggaccaagaagctgatt
gagacgaccacagggctcaacagcaccttcatccagcaggctgaggaggagcagggagca
ggaggaggtggcagcgggaccagacacctcaaggccatcaggtctgttctggctgatatg
aagaaggcccatgctgccctagaggaggacttggagtcacagttcacttcccaggaccag
gggatgcagaacggggatgctgtttccaacaccgacggccacgatcagattgacaacatg
gttgaggatagacaggaggcagaagaggataaaatggccgacactgaggacggggaggag
ctagaggaggatgggggcttgtcagaggacgcagagatggaggggagccccgcccccgcg
cctcaggacatctcggacacagagatggaggggagccccgcccccgcgcctcaagacatc
tcggacacagagacagacagccaggccaaagaccagacagcagtggtggaggaggagggt
gaccggaaaaaagacattgtgtccgtcgggccggccgtccctgacgagctcttccaaatg
gtagagagtctggcggactccgcagggttaaagcccggcaacgacaccatggaaaccacc
gctgctagccaatcagagagccccgccgccgactcaaacaggaagtcacttgaaacccat
aaggagaaggccatgcccaaggtgaagaacctgatcgtgaagctgatgcccgttccagtg
gttaccacacgcatctccaggtctatgagcaaggataaggatggaggcaaggagaagagt
aaggatggaggcaaggagaagagtaaggatggaggcaaggagaagagtaaggatggaggc
aaggagaagagtaaggatggaggcaaggagaagagtaaggatggaggcaaggagaagagt
aaggatggaggcaaggagaagagtaaggatggaggcaaggagaagagtaaggatggaggc
aaggagaagagtaaggaggaggtggaggaaggtgagggctctgaggaggacagccgccgc
tccagccgcacaaagaccacacccctcaggaagtcaccggatgggaagaacaagatggcc
gaatcctctccggagaacagtgactcagagggcatgagtctcagcaggctgaagagtaga
gccaaaggcagctcggagaaggaacgtgaggaggaggaggaggagcagcagcagagcaat
gcctcatccaaggtgaccgctgacccttctaaacaagaagtggactctgactctgacgag
gttctggacatcctgctccagactgcagcggcagaacacagcttggacgaggatgcgcag
caggacgccgatggtaaccagggcaacaggagcttcaaaaggtgcctgttcaaactcagc
aagaaagatggagaggaggaggagaatgacaaggtgaagtctgacaagaagctggcggcc
aaacgcaaactgaaagccgacgattcagacaactcagagtccgactcagacgaagacgcg
aagaagaagaagaaaaagaagtccccctcagcttctgccaaaaagacatccaagaagaag
ggctcggacggctcctccgactcggacctggagatgaagggactcagcaaactggcgacg
gggaaacggaggagcagccgtgtgaacaaggaaagagagaaggagaacaaggaaagagag
gagaaggaaagagaggaggaggagaaggagaacaaggaaagagaggagaaggagatcaag
ggcggagatcggaggcggtcgtacgaactgaaacgcaaagccagaagtagaggagccaag
cagcaagattcatcgtctgatgacgaggaggaggaggaggagggaggagggtctggagag
gagagtggagaccagcagaagattaaacccatcatggaggagactgtggtagcagggagg
ggaaccttccaccagtcctcaggagatgaaggtaaccatgacgcttctcagatggccaat
gaggaggacgatgatgatgatgcgcctgagaacagaattgccaagaagatattggcccag
atcaaggctaactactcttcaggagcagaggagagctctgacgaggacggagaagagaac
gaacagaagaaggggaagggaggagaggagcaggaggaggacgatgatgatgaatggggc
tctggctctgatgtggacatgaagacgagtgtggggcgttaccaccggctgctccgccac
aaactaacactgtacgaagtggagtcgggagaggagaaggagaaaccagccagcaagggg
aagaagaagaagaccaagaggaccagacggaaagtgggtagtgatgactcggcagactca
gactttaaggagtcagccagcagctgtgagtcaggagttagtgaggagatcagtgagaag
gaattgtcttcagaggaggagtcggagtctgagagggaaggcagtagccaaaagaggacc
acgcgctcctccgtgaagaagaaggaggagaggagctacgcccagaagaagaaacggcgc
cgcatcaagacccaggattcttcatctgacgacaagagcgggtcaggagaggacggctcg
gggaaggaggatggagacactcctaaaggacagaggaagaagatcagaaaaatcctcaag
tacgacgagctgaggactgaaacgagggatgccctgaatgaggaggaggaggagaggagg
agacgcatcgctgagagggaacagctcagggagaagctcagagaggtactcgtggtggag
gaggcgtccgccgtggcttgtccaatcacaaccaagctggtgctggatgaagacgaggag
accaaggagcccatggtgcaggttcaccgcaatctggtcacgaagctcaaaccacaccag
gtcgacggagatgaaggtaaccatgacgcttctcagatggccgatgaggaggacgatgat
gatccagagaacagaattgccaagaagatgctggcccagatcaaggctaactactcttca
ggagcagaggagagctctgacgaggatggagaagagaacgaacagaaggagaccaagagg
accagacggaaagtgggtagtgatgactctgcagactcagactttaaggagtcagccagc
agcagtgagtcaggagttagtgaggagatcagtgagaaggaatcgtcgtcagaggaggag
tcggagtctgagaaggaaggcagtagccaaaagaggaccacgcgctcctccgtgaagaag
aagaagaagaaggaggagaggagctacgcccagaagaagaaacggcgcctcatcaagacc
caggattcttcatctgacgacaagagcgggtcaggagaggacggctcggggaaggaggat
ggagacactcctaaaggacagaggaagaagattagaaaaatcctcaaggacgacaagctg
aggacggaaacgagggatgccctgaaggaggaggaggagaggaggagacgcatcgctgag
agggagcagctcaaggagaagctcagagaggtactcgtggtggaggaggcgtccgccgtg
gcttgtccaatcacaaccaagctggtgctggatgaagacgaggagaccaaggagcccatg
gtgcaggttcaccgcaatctggtcactaagctcaaaccacaccaggtcgacggggtccag
ttcatgtgggactgctgttgtgagtcggtgaagaaaaccaacaagaactctggttctgga
tgtatcctggctcactgtatgggcctgggaaaaacactgcaggtggtaaccctcctccac
acactactgctgtgtaaaaagttagacttctccacggctctgatcgtctgtcctctcaac
accgttctcaactggctcaatgagtttgagaagtggcagtacggcttcaaggacgaggag
agtttaaaggtgacggagctggccatggtgaagcgtcctcaggagagtgcgtctgctctg
cagcagtggcaggaggatggaggaatcatgatcattggctatgagatgtaccgtaacctc
acacagggtagaaacatcaagagcaagaaactcaaagagaccttccagaagactctggtt
gacccaggcccagattttgtgatctgtgatgagggccacatcttgaagaacgaggcgtcg
gacatctctaaagccatgaactccatcaagacccgacggagagtgttgctcaccggcact
ccactgcagaacgacctcatagagtgtatgtccattacttcctgttatatccagaccgct
ggcctacaggacattcggaaataa
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integrated database retrieval system
