Oncorhynchus keta (chum salmon): 118376786
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Entry
118376786 CDS
T09424
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118376786 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118376786 (stau2)
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118376786 (stau2)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118376786 (stau2)
mRNA cycle factors
Stress granule specific factors
118376786 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
118376786
NCBI-ProteinID:
XP_052340018
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All DBs
Position
28:complement(79905629..80251897)
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AA seq
648 aa
AA seq
DB search
MAQVKVQTSTPLAGPGFSPLSPLGAMPSPGPLGLQPSVNGPGPTPGCPPPSAGYGPDTPV
SANSPGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLCLEEQ
VWEAEGTSIKKAQHSTACLALTESLLPRPAPRSPTMDVNSNPGSITPTVELNGLAMKRGE
PAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGTNEFIGEGRTRQAARH
NAAMKALQALRNEPIPERPPQSPEEQKELDEGSDASKSEISLVYEIALKRNLSVCFEVLK
ESGPPHMKSFLTRVSVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFTPLVEKPKLHYK
KRPKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQVKVCGQ
VTTGTGSNKKVAKRNAAEAMLLQLGYKASTCPQSPTEMDDKGWNGQKTAFNETTTNTQKG
LLHLSPDVYQEMEASRKQGAPVNYLTPKLSDPLVVPLSPGHTPYYSPPAVATAAMARELL
MNGSGEGRSGENIGLKGKSSVQPSQQLEYLAQIQGFQVLYSDGQNGREFMTYLTLSPVQM
TFHGIGSSIEASHDQAALSALKQLSEQGLDTVDCPIKSSEVCVREDGH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcaacgcccctggctggccctggcttctcccccctg
tctcccctcggggccatgcccagtccaggacccttgggtctacagccctcagtcaatggc
cctggacccacccccggctgcccccctccctcagccgggtatgggcccgacacccctgtg
tctgccaactcaccaggcccaccccaggagaacatggcaaaccctaaagagaaaactccc
atgtgtctggtgaatgagttagcccgtttcaacaggatccaaccgcagtacaagctgctc
aacgagagaggccctgcacacgctaagatctttacagtgcagctgtgtctggaggagcag
gtgtgggaggcggagggcaccagcatcaagaaggctcagcactccaccgcctgccttgcc
ctcactgagagccttctgcccaggcccgctcctcgctctcctacaatggacgtcaacagc
aacccaggtagtatcacccctacggtggagctgaatggtctggctatgaagagaggtgag
ccagccatctaccgtcccctggaccccaagcccatgcccaactacagagccaactataac
ttcagaggcatgttcaaccaaaggtaccactacccagttccaaagatcttctatgtccag
ttgtctgtgggcactaatgagtttattggagagggccggactcgccaggcagcccgtcac
aacgccgccatgaaggccctgcaagccctccgcaatgaacccatacctgaacgaccacct
cagagccctgaggagcagaaggagctggatgaggggagtgatgcctctaagtcagaaatc
agtctggtttacgagatagccctcaagaggaacctgtctgtctgcttcgaggtcttgaag
gaaagcggtccccctcacatgaagagcttcctgacccgtgtgtctgtgggggagttctca
gcagagggcgaggggaacagtaagaagctgtctaagaagagggctgctctctccattctc
caggacctcaagaaactccccttcaccccgttagtggagaaacccaaactacactacaag
aaacgccccaagaccatcctcaagacaggtcctgattatggtcaggggatgaaccccatc
agtagactggctcagatacaacaggccaagaaggagaaggaaccggaatacctcttgctg
tctgagagaggcatgccgcgacgcagggagttcatcatgcaggtgaaggtgtgtggccag
gtaaccacgggaacagggtcaaataagaaggtggcgaagcggaatgctgccgaggccatg
ctactgcagctgggatacaaggcctccacctgcccacagagccctactgagatggacgac
aaaggctggaacggacaaaagacggcttttaacgaaactacgaccaacacccagaagggt
ctactccacctctccccggacgtctatcaagagatggaggcgagcaggaaacagggggcc
cccgttaactacctaacccccaaactatctgaccccctggtcgtccctctgtccccagga
cacaccccctactacagcccccccgcggttgccacggcagccatggcgagggagctgttg
atgaacgggtcaggagaggggaggtctggggagaacataggactgaaggggaagagctct
gtccagccctcacagcaactagagtacctggctcaaatacaaggcttccaggtgctgtac
agcgatggtcagaatggtagagagttcatgacttacctgacactctcacctgtacagatg
actttccacggcatcgggagctccatcgaagccagccacgaccaggctgctctaagtgcc
ttgaaacagctgtcggaacagggactggacacggtggactgccctatcaagagcagcgag
gtgtgtgtcagagaggacggacactga
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