KEGG   Oncorhynchus keta (chum salmon): 118376854
Entry
118376854         CDS       T09424                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118376854 (per1b)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118376854 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 118376854
NCBI-ProteinID: XP_035619539
LinkDB
Position
13:complement(7678534..7697269)
AA seq 1364 aa
MSYDDSNSTPGDDTWGRVGSTNEEEEEAGTGLSSPGSNNNHGSQSGTSDLANRVRGSSPS
GSGSGGSSGGDQRGPSSDDGERESSEGGGGSRGHQSRRSHCSSSQKDSGMMLENTESNKS
SQSQSPSPPSSSLAYSLLSASSEQDPPSTSGCSSNEQHQTARVQTQKEMLKALKELKVRL
PAECKGKGRSSTLDALQYALNCVKQVRANQEYYHQWGVEECHGCSLDLSVYTTEELDNIA
SEYTLKNTDTFSMAVSFLTGKVVYISPQGSSLLRCKPERLQGAIFSELLAPQDVSTFYSS
TAPCHLPAWATCMGSVSPLTDCTQGKSMFCRISADRAQGGEIKYYPFRMTPYQLTLRDLD
TSDPQPCCLLIAERVQSGYEAPRIPADKRIFSTSHSPSCLFQEVDERAVPLLGYLPQDLV
GSPVLLYLHPEDRPIMVAIHRKILQSAGQPFDSSPMRMCARSGEYVTIDTSWSSFINPWS
RKVAFIVGRHKVRTSPLNEDVFTPLRGCEGRPVAPEIVQLSEQIHRLLVKPVHSGGSQGY
SSLASNGSCSHEQQYRRTASSASDSKSTNAMEAMEAAVVALHKPMTFQQICKDVYMVKTS
GQQVFINSHNRALSRRHTVTALRATGEVEPIKSLIPEVACPSKPLVFNTQQLMKEEPPSA
YSYQQINCLDSIIRFLDGCNVKRKFGSSSATSASDEEKQQETAGNEKGGPATSVTLVGDS
AGVPPLAMHSHKARSVASVTSQCSFSSTIVHVGDKKPPESDVVMENAPPTPTPATPTTTR
SPPTAIINPPPPKTTSPSSRRGGGLTKEVLSAHTQQEEQAFLCRFSDLSQLRVISPSSAL
RCPLPNTNPRRRRACSPDYPAAGGSSGRRGAKRLKKQESSEQRGPLALGLTGPLRSPNVV
PMNSPPSSTYTLSVMPMGPPTTSSWPVSVGSQASLPSVPYPSGTLPLYPIYPPLSQPIQN
QMVPPMMALVLPNYMFPQLHPNLPQMTTAMNTMGSLTPQPGAAMVTPGPQQFFNPGAGFP
FPGTNVMPCPMPTMPSLMQTAMPIQTQRPASGSSTPQSCSQVPVDQEGAESPLFHSRCSS
PLNLLQLVEESPSNRLEVATALAASAQQATIPSQGTRGRSPDDSKENANDSNQDGESTPS
DLLDLLLQEDSRSGSASSGSGSDSLGTVSNGCSSSGSGTSRSRSSRTSKYFGSIDSSEND
HCRKQPAGGSRAGGDGEEQLIKCVLQDPIWLLMANTDHKVMMTYQLPTKDRETVLRQDRE
ALRAMHKHQPRFTEDQKRELSQVHPWIRTGRLPRAINISACMGCKSSPLPESTVDQGGEA
RREEGHAAHSETQGNDQEMTTEEQEVTWPTGEKKARAGETYMTH
NT seq 4095 nt   +upstreamnt  +downstreamnt
atgagttacgacgactcaaactccacccctggcgatgacacttgggggcgagtgggaagc
accaatgaagaagaggaggaggcgggaacaggattgagctcccccggcagcaacaacaac
catggcagccaatcgggaacttcggacttggccaatcgggtgcgaggatcctctccaagt
ggatccggctccggtggctcgtctgggggggaccagaggggtcctagctcagatgacggg
gaaagggagtcgagtgagggagggggcgggtccaggggacaccagtccagaaggtcccac
tgttcctccagccagaaggactctggcatgatgctggagaacacagagagcaacaagagc
tctcagtcccagagcccgtctccccctagcagctctctggcctacagcctgctgtcagcc
agctcagagcaggaccctccttccacctccggctgcagcagcaacgagcagcaccagacg
gcccgcgtccagacccagaaggagatgctgaaagccctgaaggagctcaaggttcgcctg
ccggccgagtgcaagggcaaaggtcgctccagcaccctggacgccctccagtacgccctg
aactgtgtgaagcaggtgcgagccaaccaggagtactaccaccagtggggtgtggaggag
tgtcacggctgcagcctggatctgtctgtatataccacagaggagctggacaacatcgcc
tcagagtacaccctcaaaaatacagacaccttttccatggcggtgtccttcctgacaggc
aaagtggtgtacatctccccgcagggctcgtccctgctgcgctgcaagccagagaggctc
cagggggccatcttctccgaactgctggctccccaagacgtcagcaccttctacagcagc
accgccccctgccacctgcccgcctgggccacctgcatgggctctgtgtccccactgaca
gactgcacccaggggaagtcgatgttctgtcgcatcagtgccgaccgggcgcagggaggc
gagatcaaatactaccccttccgcatgaccccctatcagctaaccctgagggacttggac
acgtcagacccccagccctgctgcttgctcatcgctgagcgggtacagtccggatacgaa
gctcccaggatccctgctgacaagcggatcttttccaccagtcacagtcccagctgtctc
ttccaggaagtagatgaaagggctgtgccgttgttgggctaccttccccaggacctggtg
ggaagccctgtacttctctacctccacccagaggacagaccgatcatggtggccatacat
aggaagatcctccagtctgcaggccagccctttgacagttctcccatgaggatgtgtgcc
cgcagtggggagtacgtgaccatcgacactagctggtcctccttcatcaacccctggagc
aggaaggtggccttcatcgtgggccgccacaaagtccgaaccagccccttgaacgaggac
gtgttcacccctctgcggggctgtgagggccgccccgtggccccagagattgtgcagctg
agcgagcagatccaccgtctcctggtgaagcctgtccacagtggagggtcgcagggctac
agcagcctggcctcaaatggatcctgctcccacgagcagcagtaccgacgcacggcctcc
tccgcctccgacagcaagtccaccaacgccatggaggccatggaggcagccgtggtcgcg
ctgcacaaaccgatgacgttccagcagatctgtaaggacgtgtacatggtcaagaccagc
gggcagcaggtctttatcaactctcacaaccgagccctgtcccggcgacacactgtcaca
gcgctccgggccactggagaagtggaacccatcaagagtctgatcccggaggtggcgtgt
ccatccaaacccctggtgttcaacacccagcagctgatgaaggaggagccccccagtgcc
tacagctaccaacagattaactgtctggacagcatcattaggttcttggacggctgtaac
gttaagaggaagtttggctcgtcctctgccacgtccgcatcggacgaagagaaacaacag
gaaaccgctgggaatgaaaaaggtggtccagctacctcagtcaccctggttggggactca
gcgggggtaccccccctggccatgcacagccacaaggcgaggagtgtagcctcagtcacc
tctcagtgcagcttcagcagtaccatcgtccacgtgggagacaagaagccccccgagtca
gacgttgtcatggaaaatgctcctcccactcctacgccagccactcccaccacgaccagg
tctccacccaccgccatcattaaccctccaccgcccaaaacaacctctccatccagccgg
agaggaggtggcctgaccaaggaggtgctctctgctcacacgcagcaggaggagcaagcc
ttcctctgtcgcttcagtgacctgagccagctgagggtgatttctccatcctcggccctg
cgttgcccactccccaacaccaacccccgccgcagaagagcgtgttcccctgactaccct
gcagctggaggcagcagtggtcgccgtggagccaagaggctgaagaagcaggagtcctca
gaacagaggggccctctggctttgggcctgactggacccctgcggagccccaacgtcgtc
cccatgaattccccccccagctccacctacaccctctcagtgatgcccatggggcctccc
accacatcctcctggcccgtctctgtaggatcccaggccagcctgccctctgtgccctac
ccctcgggtacgctccccctgtaccccatctaccctcctctctcccagcccatacagaac
cagatggtgcctcctatgatggccctggtgctgcccaactacatgttcccacaacttcac
cccaacctcccccagatgaccacagccatgaacacaatgggaagcctcacgccccagccg
ggagccgccatggttacccccggcccgcagcagttcttcaaccccggcgctggtttcccc
ttccccggtaccaacgtcatgccatgccccatgcctacgatgccctcgctcatgcaaact
gccatgcctatccagacccaacggccagcctctgggtccagcacccctcagtcatgtagt
caagtaccagtcgaccaggagggtgcagagtcgcccctcttccactctcgctgctcctcc
ccgctcaacctgctgcagcttgtggaggagtcgcctagcaaccggctggaggtcgccacg
gcgctggctgcttccgcgcaacaagccacgatcccctcacaagggactcgggggagatcg
ccagatgactccaaggagaacgccaatgattccaaccaggatggtgaatccacccccagt
gacctactggacctgctcctgcaagaggactcccgctcaggctccgcgtcctctgggtca
ggttctgactccttgggcactgtgtccaacggctgcagctcctcaggcagtggaactagt
cgcagtcggagtagccgcaccagcaagtactttggcagcatcgactcgtcagagaacgac
cactgccgcaagcagccagcaggtggcagcagagcaggaggagacggggaggagcaattg
attaagtgtgtcctgcaggatcccatctggctcctcatggccaacaccgaccacaaggtg
atgatgacgtaccagctgccgaccaaggacagggagacggtgctgcggcaggaccgcgag
gccctgagggccatgcacaaacaccagccccgcttcactgaggaccagaagagagaactg
agccaggtccacccctggatacgtaccgggcgcctgccccgcgccatcaacatctcggca
tgtatggggtgcaagtcttcccccttaccagagagcaccgtggaccagggaggagaggct
cgcagagaagaggggcacgcggcgcactctgaaacacaaggcaacgaccaggaaatgaca
acagaggagcaggaagtgacctggccaacgggggagaagaaagcaagggctggtgaaacc
tacatgacccactga

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