Oncorhynchus keta (chum salmon): 118376905
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Entry
118376905 CDS
T09424
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04140
Autophagy - animal
oke04148
Efferocytosis
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118376905 (vps16)
04148 Efferocytosis
118376905 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118376905 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118376905 (vps16)
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118376905 (vps16)
Hops complex
118376905 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF740
Motif
Other DBs
NCBI-GeneID:
118376905
NCBI-ProteinID:
XP_052371668
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAFITANWNPLGEAFYRKIELYEMGWSLRDGLKECLVAAAPYGGPIALLRQPQRPSSSAR
PQLEIYSSSGANMASFPWKSGPVRQLGWTVCDDLLCIQEDGTVLIYDLFGAFKRHFSMGN
EVVQNQVLEAKVFHSPYGTGVAIVTGASRFTLATNIDDLKLRRLPEVPGLQGAPSCWAVL
TQDRQTKVLLANGADIYILDNTSCTPVTPPGLSPQACSIVNMAVSFSYKYLALFTDSGHL
WMGSANLKDKLSEVDTKVRTPPKQMVWCRRPKSQQPSVVIMWDRLLLVAGECTDTIQYPL
DEESVCVAELDGVRIVGGSRHELLQEVPSACQDIFKIASMAPGALLLEAHKEYEKSSQKA
DEYLREIKEQSVLGEAVRQCVEAAGYEHEPETQKTLLRAASFGKCFLSNYPPEAFVSMCR
DLKVLNSVREYTVGIPLTHTQYKQMTVQVLIDRLVYRKLYPLAIEICRYLKTPEYQGVSR
VLKHWACCKVQQKEEPDESIAHAVSVKLGEAAGISYSEIAARAYECGRTELAIKLLEFEP
RSGEQVPLLLKMKRSQLALSKAIESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKHQEQDTLKDLFNQDDDHQELGNFYVKASYKEKKLEARLSLLQSAVDEYNKAKNE
FAAKATEEEMKLLRFQRRLDEEKGEALLGLSLQETLHALLTSNFHKQAEQLYRDFRVPDK
RYWWLKLTALAEKDDWEEMEKFAKSKKSPIGYLPFVEVCVKQHNKYEAKKYVSKVTPEQK
VKAHLAIGDLEGAAEAAIERRSEGEISTVLSRCSPTTDRALLERLNRARSTAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcatttataacggcaaactggaatccgctcggggaagcgttttacaggaagatcgag
ctgtatgagatgggatggagcttgagagatgggctcaaggaatgtctggtggcagcagcc
ccatacgggggaccgatcgctctcctaaggcagccacagaggccttcctccagcgcacgg
ccccagctggagatctattcctcctcaggcgcgaacatggccagcttcccgtggaagagt
ggcccagtgagacagctgggttggacagtgtgtgatgacctgctgtgtatccaggaggat
ggcactgtcctcatctacgacctgtttggtgccttcaaaagacacttcagcatgggcaat
gaggtggttcaaaaccaggtgctggaagccaaggtgttccactcaccctatggaactggt
gtcgccatagtaacgggagcctcacgcttcaccctggccacgaacattgacgacctgaag
ctgaggagactcccggaagtcccaggcctccagggggcaccctcctgctgggcagtgctc
actcaggacagacagaccaaagtgctgctggccaacggagctgacatctacatactggac
aacacatcctgcacacctgtgacccctccaggcctctctccacaggcctgtagcatcgtg
aacatggctgtgtcattcagctataagtacctggctctgttcacagactcaggacacctg
tggatgggctcagccaacctcaaggacaagctgagtgaggtggacaccaaggtgaggacc
ccgcctaaacagatggtctggtgcagaaggccaaagagccagcagccttctgtggtcatc
atgtgggacaggctcctactggtggccggagagtgtacagacaccatccaataccctctg
gatgaggagagtgtgtgtgtagcagagctggatggagtgaggatcgtaggagggtccagg
catgagttgctgcaggaggtgccctcggcctgccaggacatctttaaaatcgcctccatg
gctcctggagctttactactggaggcacacaaggagtacgagaagtccagtcagaaggca
gatgagtacctgagagagataaaggaacagagtgtattgggggaagcggtgagacagtgt
gtggaggctgctgggtatgaacatgaaccagagacccagaaaacactgctcagggcggcg
tcctttgggaagtgttttcttagtaactacccaccagaggcgtttgtcagtatgtgtcga
gacctgaaagttctcaactctgtccgggagtacactgtggggatccccctcacacacaca
cagtacaagcagatgactgttcaggtcctcattgacaggttggtgtaccgtaagctgtat
cccctggccattgagatctgtcgctatctgaagacaccagagtaccagggagtcagcaga
gttctcaaacactgggcctgctgcaaggtccagcagaaagaagagcctgatgagtccata
gcacatgctgtcagtgtgaagctgggcgaggcagcaggaatctcctactctgagatcgct
gccagagcatatgagtgtggcaggactgaactggccatcaagttgttggagtttgagcct
cgttctggggagcaggtcccccttctactgaagatgaagaggagtcaactggccctgagt
aaagctatagagagtggagacacagacctggtttacacggtggtgacatacctgaagaac
gagatgaacagaggagacttcttcatgacgctcagaaaccaaccggtagctctgagcctc
taccggcagttctgtaagcaccaggaacaggacacactgaaggatctgttcaaccaagac
gatgaccatcaggagctgggtaacttctacgtcaaggccagttacaaggagaagaagctg
gaggctcgcctgtctctgctgcagagtgctgtggacgagtacaacaaggccaagaacgag
tttgcagccaaggcgacagaggaggagatgaagctgctacgtttccagaggcgtctggat
gaggagaagggagaggctctgctgggcctgtcactccaggagactctgcatgccctcctc
acctccaacttccacaagcaggctgagcagctctacagggacttcagggtgccagacaaa
aggtactggtggctgaagctgaccgctctggcagagaaggatgattgggaagagatggag
aaatttgccaagagcaagaagtcccccatcggctatctaccctttgtggaggtgtgtgtg
aaacaacacaataagtacgaggccaaaaagtatgtttccaaggtgaccccagagcaaaag
gtcaaagcccacctggccataggtgatctggagggggcagccgaggcagctatagagagg
cggagtgaaggagagatcagcactgtcctgtcccgctgttctcccaccacagaccgagcc
ctgctggagagactcaaccgagccagatccactgctgccaaaaagtga
DBGET
integrated database retrieval system
