KEGG   Oncorhynchus keta (chum salmon): 118376950
Entry
118376950         CDS       T09424                                 
Symbol
dcc
Name
(RefSeq) netrin receptor DCC
  KO
K06765  deleted in colorectal carcinoma
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118376950 (dcc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oke04515]
    118376950 (dcc)
Cell adhesion molecules [BR:oke04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   118376950 (dcc)
SSDB
Motif
Pfam: Neogenin_C fn3 Ig_3 I-set ig Ig_2 Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Ig_Rha78A_N Fn3_VIN3 V-set Interfer-bind fn3_SORL1 C2-set_2 Fn3_R-PTP-O C2-set_3 CRLF2-like_D2 Ig_4 Protocadherin EphA2_TM GH101_dom-5 TM_ErbB1 Herpes_UL74
Other DBs
NCBI-GeneID: 118376950
NCBI-ProteinID: XP_052314585
LinkDB
Position
12:complement(53218584..53899926)
AA seq 1481 aa
MEGSFGCIWAKRLSAFVWLCYLAGDSTSYSAETSSSSPSQTGQVFLDFSLVLEPQDTVTL
RGGVLQLDCEAQSDQGIPVIVWKKDGVLLSAVVDERRQQFPNGSLVVQNVVHSRHHRPDE
GLYQCLAALEGVGAIVSRTAKVTVSGPLKLVVPTESVSSYLGDTALLRCEVTGDPMPVVR
WQKNREDLPLTLTPDSRVVVLPSGSLQVSKVQPPDSATYRCLADNPGSARTGSDADLRVL
PEPGTTRGLLFLQQPQGVTSLLGRDAVLECSASGFPTPAFHWMRGTEIIQSRSKKYSLLG
GSNLLISSVTDDDSGSYSCVAFNKNQNITASCELSVLVPPQFLNYPTNTYAYESTDMELE
CAVTGNPPPTVRWMKNGEEVIPSDYFQIVDGSNLQILGLVKSDEGFYQCVAENEAGNAQA
MAQLILRESVVPSSGVLLPSAPRDVAPVLVSSRFVRLSWRPPQETRGTVQTYGIYYSQDT
VNRERSVNVSEPETLQLTVSNLKPEETYSFRVVAYNDNGPGERSETLKLTTPPELLVPGP
VENLQVESISPTSIRASWDAPVYANGPLLGYRLLWTETPSGKEQSVEVNGQSYKMEGLQK
FTEYSLCVLALNRYGPGISTEDMSITTLSDVPSGPPQNISLEVVLSRSIKVSWQPPPPNS
QNGFITGYKLRHRKTGRRGDQEAIEPNNFWYLFTDLEKGSQYSFQVSAMTANGTGPASEW
FTAETPENDLDESQVPNQPSSLHVRPLPNSIIMSWTPPLNPNILVRGYIIGYGVGSPYAE
TVRVDSKQRYYAIENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSITDSIDPSDDDLFH
LFDKYPTPMPDTSTPMIPPVGVQAVALTPDSVRVSWADNSMTKNQKSTEVRYYSVKWKTS
YSTSGKFKSADTTALSHTVTGLKPNTMYEFAVMVTKGRKSSTWSMTAHATTYETSPSSAP
KDLTVISREGRPRAILISWQPPMEANGRVMGYILYYTLDKNMPIDDWVMESISGDRLTHQ
VMDLNLDTVYYFRIQAKNAKGVGPLSDPIHFRTNKVEHPDKMANDQGRHGDGSYWPSDNN
LIDRSSLNDIGQMRPPHGSVTPQKNSNLLVIIVVSVGAVTVVVVIIVALICTRRSSAQQR
KKRATHSTGKRKGSQKDLRPPDLWIHHEEMELKNIEKPTSAAPSGCDSPIQGSIQEIRSQ
SVSHSQSESQMGSKSSHSGVDNDEASSCISTLERSLAARRATRTKLMIPMDSQPSNTPVV
SAIPVPILESSQYPGILPSPTCGYNHGTLTTHPKFTLRPMPFPSLTVDRCYAAAMSTESP
LGVQQQQQHTLITSSSSQPGVGGAGGGGELSLPGAEEVGATSTRTIPTACVRPTHPLRSF
ANPLLPPPMGTIDPKVYTPMMPHSSASLPKPTVKTASLGQVGKARSPLLPVSVPTAPEMG
EEGQKQPEDSANVYEQDDLSEQMASLEGLMKQLNAITGSAF
NT seq 4446 nt   +upstreamnt  +downstreamnt
atggagggatcatttggatgtatttgggcgaaaagactttcggcatttgtctggttatgc
tatctcgccggcgattcaacatcatatagtgcagagacctcatcgtcatctccgtcccag
acaggccaggtgttcttggacttcagcttggttctggaaccccaggacacggtgacattg
cggggcggtgttctccagctggactgcgaggctcagtcagatcagggtattccagttatc
gtctggaagaaggacggggtgctgctcagcgccgtggtggacgagaggagacagcagttc
cctaacgggtctctagtggtccagaacgtggttcactcacgacaccaccgacctgacgag
gggctctaccagtgtctggcagcgctggagggagtgggggccatagtcagtcgcacggct
aaagtcacagtctctggtcccctgaagctggtggtccctacagagtcagtgtcctcctac
ctgggtgacacggccctgctgcgctgtgaggtgactggtgatcccatgcccgtggtacgc
tggcagaagaacagagaggacctgcccctcaccttaaccccagatagcagggtcgtggta
ctgccctccggctcgctccaggttagcaaggttcaaccaccagactctgccacctaccgc
tgcctggcagacaaccctggcagcgcccgcaccggcagtgacgcagacctacgagtgttg
ccagagcctggaaccaccaggggccttctgtttctccagcagccccagggagtcacctcc
ctcctggggagagatgctgtgttggagtgctctgcttcggggttccccacccccgccttc
cactggatgagaggcactgagattatccagagcaggtcgaagaagtactccctcctgggc
ggcagtaacctcctgatcagcagtgtaacagacgatgattcaggctcctacagctgcgtg
gcgtttaacaagaaccagaacatcacggcttcctgcgagctctccgttctcgtgccaccc
cagttcctgaactaccccaccaacacgtatgcctatgagagtacggacatggagctggag
tgtgctgtaacggggaaccctcctcctacggtgcgctggatgaagaacggagaggaggtc
atccccagtgactacttccagatcgttgatggcagtaacctccagatccttggtctggtg
aagtcagatgaaggtttctatcagtgtgtggctgagaacgaagcagggaacgcccaggct
atggcccagctcatactgagagagtcagttgtccccagctcaggtgtcctcctcccctct
gctccccgtgacgtggcccctgtccttgtgtccagccgttttgtccgcctcagctggcgc
cccccgcaggagaccagaggaactgtccagacttacggcatctactactcccaggacaca
gtcaacagggagaggtctgtgaacgtgtcggagccagagaccctccagttgactgtcagt
aacctgaagccagaggagacctactccttcagagtggtggcctacaacgacaacggcccc
ggagagagatccgagacactcaaactcaccactccgccagagttgctggtccccgggccg
gtggagaacctccaggtagagtccatctcccccacctccatccgggcctcctgggacgcc
ccggtctacgccaacgggcccctgctggggtacagactgctctggactgagacaccctcc
ggcaaggaacagagtgtggaggtgaacgggcagagttataagatggagggacttcagaag
ttcacagagtactcgttatgtgtgctggcgttgaaccgctacggccctgggatcagcaca
gaggacatgagcatcaccacgctttctgatgtaccgagtggccctccacagaacatctcc
ttggaagtagttctgtcaagaagcattaaggtgagctggcagccccctcctcccaacagc
cagaacgggttcatcaccggctataagctccgacaccggaagaccggccgacgaggagac
caggaggccatcgaacctaacaacttctggtacctgttcacagacctggagaaaggcagt
cagtacagtttccaggtctctgccatgacagctaacggcacgggcccagccagcgagtgg
ttcaccgccgagacgccagagaatgaccttgacgagagccaagtcccgaaccagccgagt
tccctccacgtccgacccctgcccaacagcatcatcatgagctggactcctcccctaaac
cccaacattctagtacggggttacatcattggctacggagtaggaagtccctacgccgag
acggtcagggtggacagtaagcagcgatactacgccatagaaaacctggagcccagttcc
cactatgtcatctccctaaaggcgttcaacaatgcaggagagggtgtccccctgtatgag
agtgctgtgaccaggtctataacagactccattgatccgtcagacgacgacctgttccat
ctgtttgataaatatcctactcccatgccagatacgtccacccccatgatccccccagta
ggtgtccaggccgtggccctgaccccagactctgtcagggtcagctgggccgacaactcc
atgaccaagaaccagaagagcactgaggttcgctactactccgtcaagtggaagaccagc
tactctactagcgggaagttcaagtctgcagacactacagccctcagccacacagtcact
ggcctcaaacccaacaccatgtacgagtttgctgtcatggtcaccaagggccgtaagtcc
agcacgtggagtatgacagctcacgctactacatatgaaacgtctcccagctccgcccct
aaggacctgacggtgatcagcagggagggaagacccagagccatcctgatcagctggcaa
ccccccatggaggctaacggacgagtcatgggctatatcttgtactacaccctggataag
aacatgcctatagatgactgggtaatggagagtatcagtggagaccgtctgacccaccag
gtgatggacctgaacctggacaccgtctactacttcaggatccaggctaagaatgccaag
ggagtgggtcccctgtcagaccccatccacttcaggactaacaaagtggaacacccagac
aagatggctaacgatcaaggtcgccatggagacggaagctactggccctctgacaacaac
ctgattgataggagcagtctgaacgacattggtcagatgcgtcctcctcacggcagtgtg
acgccccagaagaacagcaacctcctggtcatcatcgtggtctccgtgggagccgttact
gtggtagtggtcatcatagtagcgctgatctgcaccaggcgctcctccgcacaacagaga
aagaagcgtgccactcacagtacagggaagcgaaaaggtagtcagaaggacctgagacct
ccagacctgtggatccatcatgaggagatggaactgaagaacattgagaagcctaccagc
gccgccccctctggatgtgattcgcccatccagggttccatccaggaaatccggtctcag
tctgtcagtcacagccaatcagagagtcagatgggaagcaagagcagccactcaggtgtg
gacaatgacgaggcttccagctgcatctctacgttagagcgctccctagctgcccggagg
gcaacacgtaccaagctgatgatccccatggactctcagcccagcaacacccctgttgtc
agtgccatcccagtgccaattctggagagcagtcagtaccctggcatcctgccctcgccc
acctgcgggtacaaccatggtactctgaccacccaccccaagttcaccctgagacccatg
cccttccccagcctcaccgtggaccgatgctacgcagcagcgatgtcaacagagagtccg
ctgggggttcagcagcagcagcagcatactctgattaccagcagcagcagtcagccaggt
gtaggaggagcaggaggtggaggtgagctctctctccctggcgcagaagaggtaggggcc
acctctacccgtaccatccccaccgcctgtgtcaggccaacgcaccccctacgaagcttc
gccaatcccctcctgcctccccccatggggaccatcgaccccaaggtctacacacccatg
atgccacattcaagtgccagccttcccaagccaacagtaaaaacagcatctctggggcaa
gttggcaaggccagatcaccactactaccggtctccgtgccaacagcccccgagatgggt
gaagagggacagaaacaaccagaagactcagccaatgtttacgaacaggacgacttgagt
gaacagatggcgagcctagagggactcatgaagcaactcaacgccatcactggctcggcc
ttttaa

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