Oncorhynchus keta (chum salmon): 118377005
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Entry
118377005 CDS
T09424
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04518
Integrin signaling
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
118377005
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118377005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118377005
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118377005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
CH
SH3_2
SH3_9
SH3_1
RhoGEF67_u1
PH
CENP-Q
IcsB_M
HAUS-augmin3
Mis12
Motif
Other DBs
NCBI-GeneID:
118377005
NCBI-ProteinID:
XP_035619711
LinkDB
All DBs
Position
4:complement(50609016..50638939)
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AA seq
774 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGSVPKYCQDP
RNEADCIANIKDFLRGCTSLKVERFEPECLYTGENFNKVLTTLLGVNFATQDCGTERSCP
QSGTSAPSQSTSSHTLSSSKSKSLRRPSKPVEMSENGGGGLLLVKARFQFKQNNEDELSF
NKGDLIGVSRQEEGGWWEGTLNGKTGWFPSNYVREVKPCDKPVSPKATQLTKNYYSVVVQ
DIQEHEREFVKELQTVLSSYLRPLLASDKLSVTDSGILGANLEEILTFQQGLVLALEECT
KVPESQQRVAACYLNLIGQIRMLYLSYCSSHPSAVCVLTDHSEELGTFMESQGASTPGIL
TLTTSLSKPFMRLDKYPVLLQELERHVEEAHPDYSDILKATVAFKSLVTQCQDLRKRKNL
ELQILSEPVRGWEGDGMKSLGHVAYMSQVHMQNGTNEEKEERYLMMFPSVLVMLSASPRM
SGFIYQGRLPLTGSTVSRQTDDTENGHYAFDITGSMFDRVTVICSNPQELQDWLDHLNTY
TKGGSPVGTIIRNEGGKPLSMVGTPTHQSHLPIFITPSQGNRGPLEPPKTTKPWSLSCLR
PAPPLKPSAALGYKERMSYILKDSGKSPRPIKKFLPKRKTERKPSDDEFLLRKSTAALEE
DAQILKVIESYCTGASLHQNNTAVRKDSVPQVLLPEEEKMVVEEMKNNGQTIIEEKSLVD
AVYALKDEVHELKKESKWIKQCLEDEQKSRKELERVVRKLAKQKNDCAWEDGDH
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaagagcagacggttacgtggctgatatcattaggggtacttaattcaccc
aagaagaacatagctgacccagaggaatttctgaaaacatctctgaaagatggggtcgtc
ctgtgcaaacttatggagcggctcgtgcccggctctgttccaaagtactgtcaggatccg
agaaacgaagccgactgcatcgctaatatcaaggactttttgagaggatgtacatccttg
aaagtagagcgatttgaaccagagtgcctgtacactggggagaactttaacaaagtgctg
accactctgctgggagtcaactttgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacatccgctcctagtcagtccacctcttcccacacactatcctcatccaag
tccaagtccctgcgcagaccatccaaaccagtggagatgtcggagaacggcgggggcggg
ctgctgctggtgaaggcgcgcttccaattcaagcagaataacgaggatgagctgtccttc
aacaagggagacctgatcggtgtgtcacgccaggaggagggcggctggtgggagggcacg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgcgat
aagcctgtgtctcctaaagccactcaacttaccaagaactactacagtgtggtggtgcaa
gacatccaggagcatgagcgggagtttgtcaaggagctgcagacagtcttgagctcttac
ctacgacctctactggcaagcgacaagctgagtgttacagacagtggcattctgggcgct
aacctggaggagatcctcaccttccagcagggcctggttctggctctggaggagtgtacc
aaggttccagagagccagcagcgagtggctgcctgctacctcaacctgattggtcagatc
aggatgctgtacctgtcctactgctccagtcacccttcagctgtctgcgtactcactgac
cacagtgaggagctgggtacgtttatggagagccagggggccagtacgccaggcatcctg
accctgaccaccagcctgagtaaacccttcatgaggctggacaagtaccccgtactgctg
caggagctggagagacacgtggaggaggcccacccggactacagtgacatcttgaaggca
acggtggcttttaagagcttggtgacccagtgtcaggacctgcggaagcgtaagaaccta
gaactacagatcctgtcagagccagtgagaggctgggagggagacggaatgaagtctctg
ggtcacgtggcctacatgtcccaggtgcacatgcagaatgggaccaatgaggagaaagag
gagcgctatctcatgatgtttcccagtgtgctcgtcatgctgtctgctagtccgcggatg
agtggcttcatataccagggaaggctgccactgacgggctccacggtctccagacagaca
gacgacacagagaacggccactatgcctttgatatcacagggagcatgtttgatcgtgtc
acagtgatctgcagtaacccccaggaactgcaggactggctggaccatctcaatacctac
accaaaggcggaagccctgtgggcaccataatcaggaacgagggggggaaaccgctcagt
atggtgggcactcccactcaccagtcccacctgcccatcttcatcacccccagccagggc
aaccggggaccactggagccccccaagaccaccaaaccctggtccctgagctgcctgcgt
cctgccccgcccctcaagccctctgctgcactgggctacaaggagagaatgtcttatata
ttgaaggactccggtaaaagtccgaggcccattaagaagttcctcccgaaacgcaaaacg
gaacgaaaaccttccgacgatgagttcctcctgcggaaaagtacagctgctctggaggag
gatgcacagattctgaaggtgatcgagtcctactgcacaggggccagcctgcatcagaac
aacacggcggtgaggaaagattctgtccctcaggtcctgctgccggaggaagagaagatg
gtggtggaagagatgaagaacaacggtcagaccatcatagaggagaagagtctggttgat
gcggtgtacgctttaaaggatgaggtccatgaattaaagaaggagagtaagtggatcaag
caatgtctggaggatgagcagaagtctcgtaaggagctggagagagtggtcaggaagctg
gccaagcagaagaacgactgtgcctgggaggatggagaccactga
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