KEGG   Oncorhynchus keta (chum salmon): 118377107
Entry
118377107         CDS       T09424                                 
Name
(RefSeq) nibrin-like
  KO
K10867  nibrin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03440  Homologous recombination
oke04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    118377107
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    118377107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oke03032]
    118377107
   03400 DNA repair and recombination proteins [BR:oke03400]
    118377107
DNA replication proteins [BR:oke03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    118377107
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     118377107
    BRCA1-C complex
     118377107
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT
Other DBs
NCBI-GeneID: 118377107
NCBI-ProteinID: XP_052358581
LinkDB
Position
Unknown
AA seq 840 aa
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDSPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLH
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFIELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTSKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMATGNSQALLPHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNRMADSESMRKKPTIPGATLSQNVPVDETLMPAVSQNITAYAVNTEPS
QGISGVDVAGVSAVEETPKRDQSRTTSHLNRSKPSGRELSGTCTVAETMMSSFSASDSTG
GGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGRVQTMSPQKRSSQKQQVSQKCSPQKQ
SALTNFFQPVGKKRPREGKESPTVQSEAKFSRREEEKEKMKRTVPQHSETSNSTHTPTGR
SQGQHSSGAHLFPGQTEALSEGFSNPAQQGLQSRKRKEMEEETKGSGASEIEMDELESIM
SEDMDELDEPMSASQGQRLKLREQSSTNQGQRSQLIDKSSTNRKSLLETVDLTSANKKQR
VYSVEPIAANHRSGLDSEERSSASRQQRAEPVAEVKDEEVSFIESKPVNGVTPGHLEEPE
TDVKQEASGLGGENLPSRLIVVEFKSLTVATPARPKPRPMETHGNVIRKDFKRFCKVPVP
GAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPIKKR
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgtggacactgaaccctttagaatccggaggtgtcacccactacctcctgccagagaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtcaggagactcccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcat
cttctgggtggccggctgactaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcattgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttctttccagagatagacgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactagcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
acgggaaactcccaagcactactgccccactccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccttccaatcgaatggctgactcagaatcc
atgagaaagaaacccaccatccctggcgccacgctatcccagaatgtaccagtggacgag
actttaatgccagcggtgtctcagaacatcacagcctatgctgtaaacacagagccgtca
cagggcatcagtggggtggacgtggctggggtgagcgcagttgaagagacccctaagagg
gaccagagccggaccacctctcatcttaaccgatccaaaccctcaggccgagagctgtca
gggacctgcacagtggcagagacaatgatgtcatcattcagtgcctcagacagcactggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaatggaagagtgcagacgatgtcc
ccacagaagcgctcctcccagaaacaacaggtctcccagaaatgttccccccagaaacag
tctgccctcactaatttcttccagccggtcggcaagaaaagacctcgggaaggcaaggag
tcccctactgtccaatcagaggccaagttctccagaagggaagaagagaaggagaagatg
aagaggacagtaccacagcactcagagacctccaactccacacacacccccacaggcagg
tcccagggccaacacagctcaggtgcacatctgtttccaggtcagactgaggctctgtca
gaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatggag
gaggagactaaagggagtggggcttcagagatagagatggacgaactggagtccatcatg
tctgaggacatggacgaattggatgagcccatgtcagccagtcaaggccagcggttaaag
ttgagggaacagagttcaaccaatcaaggccagaggtctcaactgatagacaagagctca
accaatagaaaatcgctcctagagacagtggatcttacctctgccaataagaaacagcgg
gtttattcagtggaaccaatcgcagccaatcataggtcaggcttggattcagaagagcga
tcgtcagccagcagacaacagcgagcggagcctgtagctgaggtcaaagacgaagaggtg
tcattcattgaatcaaaaccagttaatggtgtgacccctggtcatctggaagagccagag
actgatgtcaaacaggaagcctcaggtttagggggtgagaatctccccagcagacttata
gtggtggagttcaaatccctcaccgtggcaacaccggcaagacctaaaccacgccccatg
gagacgcacggcaatgtcatcaggaaggactttaaacgcttctgcaaggtcccagttccc
ggtgcccagggtttgcccaacatcatcggcgggtcagacctgttggcccacaaccgaggc
aagaactctgagctggaggagtggctgagagacgcagcagaggatgagcgtcagaacaag
aaagaggagactttgggagatgaccttttcaggtacaaccccaaacccatcaagaaaaga
tga

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