Oncorhynchus keta (chum salmon): 118377114
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Entry
118377114 CDS
T09424
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118377114
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
118377114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Med25
VWA
Motif
Other DBs
NCBI-GeneID:
118377114
NCBI-ProteinID:
XP_052375124
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Position
5:complement(23781606..23796469)
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AA seq
753 aa
AA seq
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MDLPIKPGANQVADVVFVIEGTANLGPYFESLRKHYILPAIEYFNGGPPAETDFGGDYGG
TQYGLVVFNTVDCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLSVALQ
LFDDFKKMREQIGQTHKVCVLLCNSPPYLLPAVESVSYTGCTADNLVKIIRDRGIHFSVV
SPRKLPALRALFDRASPVGGQVDPHPDYSQDPFHMILVRGISLPVSSGGGSGPLKPILPP
QPLPVSQPPLGPASQAPPPIITAHPYQPPPSLNAAQAAAQMAVEAANNQKSRFPGMVNPG
PPFSGQSTLPSVAGVKLAPSSQPSLSTVTIVSTPMLPQQQVPPPQQQQVQPPGQPQPNQQ
QPVPPQQQQPTANQQTPPSSQPGMPGVSAAQANPIGGQQQGVANKIVAWSGVLEWQEKPK
ASSMDSNTKLTRSLPCQVQVNQGENLNADQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQF
LFTNKDVESLKGLYRIMATGFAGCVHFPHSAPCEVRVLMLLYSSKKRIFMGLIPNDQSGF
VNGIRQVITNHKQVQQHRSLGSGGPMPGPPGQVQPNQNFLNRPQGPIPVSHGNVQQQSVV
VGMPSVSQVTLMEEQQRQANLMTMRASGAPNQQPPVTGAPPNQVAQGGQAPPQGAMLRLP
NPGANPQLRSLLLSQQQPQGGVGHMQGMMPHQGLGGQLVHPTPGVGPQMQAQWRQPLAGQ
MMMAAGQRGPGAQPPGMPQVSSVMEDEILMDLI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcccattaaacctggcgccaatcaagtggcagacgtggtgttcgtcatcgaa
ggaactgcaaacctcggcccctattttgaatccctcagaaaacattacatactacctgca
atcgagtacttcaatggaggccccccagcagagacagactttggaggagattatggaggc
acacagtatggtcttgttgtgttcaacacagtggactgtgctcctgaatcctacgtccag
tgtcacgcaccaaccagctcagcctttgagtttgtctcgtggattgacagcatccagttc
atgggaggaggagcagagagctgtagtctcatcgcagagggtctgtctgtggccttgcag
ctctttgatgacttcaaaaagatgagggagcaaataggtcagacacacaaagtctgtgtg
ctgctgtgtaactctccgccatacctgctccctgccgtggagagtgtcagctatacgggc
tgcactgcagacaatctggtcaagatcatcagagatagagggattcatttttctgtggtg
tcgccacggaaactgccagcgttacgggcactgttcgacagggcatcaccagtcggggga
caggtcgacccccacccagactacagccaagaccccttccacatgatcctggttaggggt
atctcacttcctgtgtcatcagggggaggatcgggccctctcaaaccaattctaccccct
caacccctgcctgtcagtcagcctcctcttggtcccgcctcgcaggctcctccaccaata
atcacggcccatccatatcagcccccaccttcccttaacgcggcccaggcagctgcacag
atggctgtagaggcagccaacaaccagaagagtcgcttcccaggcatggtcaatcctggt
cccccattcagcggtcagtcaactctcccatctgtagcaggagtgaagttggctccctcc
agtcagcccagcctatccacagtcaccatagtttccacacccatgttgcctcagcaacaa
gtccctcccccacagcagcaacaagtccagccgccaggacaaccacagcccaatcagcag
cagccggtgccccctcagcagcagcagcccacagccaatcagcagacgcccccatcctca
cagcctggcatgccaggtgtgtctgcagcccaggcaaatccgattgggggacagcagcaa
ggcgttgccaataagattgtagcatggagtggggtactggagtggcaagagaagcccaaa
gcctcgtctatggattccaataccaaactcactcgctccctgccctgccaggtgcaagtc
aaccaaggagagaacctaaatgccgaccagtggccacagaagctcatcatgcaattgatc
ccacaacagctactgacaacactcggtcccctcttcagaaactctagaatggttcagttt
ctcttcaccaacaaagatgtggagtcactaaaaggtctttatcgtatcatggccactgga
tttgcggggtgcgtccacttcccccacagcgccccctgtgaggtgcgggtgctcatgctg
ctctactcctccaagaagaggattttcatgggcctcatccccaacgaccagagtggcttc
gtcaacggcatccgacaggtcatcaccaaccacaaacaggtccagcagcaccgctcgtta
ggttcaggagggccgatgccagggccacctggccaggttcaacccaatcagaacttcctc
aaccggccgcaggggcccatccctgtctcccatggcaacgtgcagcagcagtctgtggtg
gtgggcatgccctctgttagtcaggtcactctgatggaggaacagcagagacaggccaac
ctgatgacgatgagagcatcaggcgcacctaatcagcagccgcctgtcacaggtgctccg
cccaaccaggtcgctcagggtggacaggccccgccccagggtgccatgctccgccttcca
aacccaggagccaatccgcagctgcgcagtctcctcctcagccaacagcagccacagggg
ggtgttggtcacatgcagggcatgatgcctcaccaggggctgggagggcagctggtccac
cctactccaggagtgggtccccaaatgcaggcccagtggagacagcccctggcaggtcag
atgatgatggctgctggtcagaggggccctggagcccagccccccgggatgccccaggtg
tcttccgtcatggaggacgagattctcatggaccttatttga
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