Oncorhynchus keta (chum salmon): 118377156
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Entry
118377156 CDS
T09424
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118377156 (fubp1)
03041 Spliceosome [BR:
oke03041
]
118377156 (fubp1)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118377156 (fubp1)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118377156 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
118377156
NCBI-ProteinID:
XP_052331828
LinkDB
All DBs
Position
23:complement(268150..293222)
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AA seq
537 aa
AA seq
DB search
MPDRSVTLTGSPDSIQAAKRLLTEIVDKGRPTPAFHHNDAGGPGMSVQEMLVPASKAGLV
IGKGGETIKQLQERAGVKMVMIQEGPQNTGADKPLRISGEPFKVQQAKDMVMELIREQGF
REQRGEYGSRMGGGGGGGGGEGLDVPVPRFAVGIVIGRNGEMIKKIQSDTGVRIQFKPDD
GSTPERIAQIVGPPEQSQHAAEIISDLLRSVQQGGPGGPNGGGRGRGRGGNGGGNWNMGP
PGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGS
HQQIDYARQLVEEKIGGPVSPMGGPQGPPGPHGGPSPHGPPGPPGHPAQMGPYNPGPYNQ
GPPGPHGPPAPYQPQGWGNGFPHWQQGQPDPGKAAADANAAAWAAYYSQYQQQPQAPMTP
TGGAPGTTQANGQGDPKGPGHTGQADYSKAWEEYYKKMGQQSQQPQDYTKAWEEYYKKQG
QAAPQAGAAPGGQPAGQPAGQPDYSAAWAEYYRQQAAYYGQGSPQAMGAQPQAPQGQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcctgataggtcagtcacactgacaggatccccagactcaatacaagctgccaagagg
ctgctgacggagatcgttgataagggtcgtcctactccagccttccaccacaacgacgcc
ggtggccccggtatgtctgtccaggagatgctggtccctgcctccaaggctggcctggtc
atcgggaagggaggagagaccatcaaacagctgcaggagagggccggggtcaagatggtc
atgatccaggaagggcctcagaacacaggagcggacaaacctctacgcatctctggggaa
ccttttaaagtccagcaagccaaagacatggtgatggagctgatcagagagcagggcttc
agggagcagagaggagagtacggctccaggatgggcggcggtggaggaggaggaggtggt
gagggcctggatgttcctgtccccaggtttgcggtaggaatcgtgatcgggagaaacgga
gagatgatcaagaagatccagagcgacacaggagtcaggatccagttcaaaccagacgac
ggcagtaccccggagaggatagcccagatcgtgggtcctcctgaacagtcccagcatgca
gcagagataatctctgacctcctgaggagtgtccagcagggggggccgggcggtcctaac
ggagggggcaggggtagaggcagggggggtaacgggggtggtaactggaacatgggtcct
ccaggtggactgcaggagttcaccttcaccgtcccgaccatgaagactggactcatcatc
ggcaaaggaggagagaccatcaagggcatcagtcagcagtctggagcgcgcattgagctc
cagagaaatcctccccccaactccgaccccaacattaagatgttcaccgtccgaggatct
catcaacagatagactacgcacggcagctggtcgaggagaagatcgggggtccagtcagt
ccaatgggtggtccccaaggtcctccaggcccacacggaggtccgtctccccacggcccc
cccggtcctcctgggcaccctgctcagatgggcccctacaaccccggcccctacaaccag
ggaccgccaggaccacatggtcctccggctccctaccagcctcagggttggggcaacggc
ttccctcactggcagcaaggacagcctgatcctggtaaagctgcagctgatgctaacgca
gcggcctgggcagcgtattactcccagtaccagcagcaaccccaggcccccatgacgccc
accggcggtgcccccggcaccacacaggccaacgggcaaggtgaccccaagggacctggg
catactgggcaggccgattactccaaggcctgggaggaatattacaagaaaatggggcag
caaagtcagcaaccacaggactacaccaaggcctgggaggagtactacaagaaacaaggt
caagcggccccacaggcgggagctgcaccaggtggtcagccagccgggcagccagccggt
cagccggactacagtgctgcctgggcagagtactaccggcagcaggctgcttactacgga
cagggcagcccacaggccatgggggcccagccacaagcacctcagggccagtaa
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integrated database retrieval system
