Oncorhynchus keta (chum salmon): 118377371
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Entry
118377371 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 29-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118377371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118377371
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118377371
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118377371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
MRP-S31
DUF948
BLOC1_2
CCDC22_CC
zf-RING_6
DUF4363
ALMT
5_nucleotid
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
118377371
NCBI-ProteinID:
XP_052362955
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSGNLWTEEQFNCPVCLDLPNEPVTIPCGHSYCMGCIKDYWSKDNPRSPGVYSCPQCRQT
FCPKPSLSRNTMLAEAVEQLRKGALTTSARESIRSAHRANTMGRAKGGSRGGGVSRLPAM
AVPCDMCHGAGDQQAAVKSCLVCMASYCEAHLKPHQTKAELKKHELIAPTGKLAQKICTE
HKYLQEFYCRQCQMFVCWLCTSNQHKDHETTSTNAERTERQKELAEIQTENHQRLKEREG
ELKDMKKMLEATKRSADRVHDDTETVLSELQRSVERLQELVEGVMNQAGQEKVSEAQDVV
DKLEAEISELKRRDKDMKEVFRCEDNIHFLETCESLCSPFECNDLSCVVANPEATFEPVR
EAILNLRERVEDMCNVELGKITKTVNDTTLFTLGEKAKKNGGQKTGGFRSLFSGLGSKAT
TNNRPAAPTPTVSVAVRGPNSRGVGLRSQDVRSREEPRADRDRPRREEREPAREAALRPS
TRSSPTQSRRKPARNSPTQSRRETRRRSPSPTPSRRESARPRPTPSRREPARPSPTPSRR
EPARPSPTPSRRETPRPEPTTTPTPSAVTQATPTPGAVTQATPASGAFSRMGSIASLFRS
HRRATPAPGPVNNNTGGVNPCESRPERMIEASSSQKATSSPT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaatctgtggacggaggagcagttcaactgtcctgtgtgcctggacctcccc
aatgagccagtcaccatcccgtgtggccacagctactgcatgggctgcatcaaggactac
tggagcaaggacaaccctcgctcccctggagtctacagctgcccccagtgccgccagaca
ttctgtcccaagccctccttgtccaggaacaccatgctggcagaggccgtggagcagctc
cgcaagggggccctcaccacctccgccagggagtccatccggagcgcccaccgtgccaac
accatgggtagagccaagggaggttcccgtggtggtggtgtcagcaggctgccagccatg
gccgtgccctgtgacatgtgtcacggcgctggagaccagcaggctgcagtgaagtcttgc
ctggtgtgtatggcgtcctactgcgaggcccacctgaaaccgcatcagacgaaagcggag
ttgaaaaagcacgagctgattgcgcccacgggcaagctggcgcagaagatctgtaccgag
cacaagtacctgcaggagttctactgtcgtcagtgccagatgtttgtgtgctggctgtgc
accagtaaccagcacaaggaccatgagaccacctccaccaatgcagagcgcacggagaga
cagaaagagctggctgagatacagacagagaatcatcagagactgaaagaaagagaagga
gagctgaaagacatgaagaagatgctggaggcaacaaagcgctcagcagacagggtacat
gatgacacagagacggtgctgtcggagctccagcgctcagtggagaggctccaggagctg
gtggagggtgtgatgaaccaggctgggcaggagaaagtaagcgaggcccaggacgtggtg
gacaagctggaggccgagatctcggagctgaagaggagagacaaggacatgaaggaggtg
ttccgctgtgaggacaacatccacttcctggagacctgtgagtctctgtgcagcccgttt
gagtgtaatgatctgtcgtgtgtggtggccaatccagaggctacgtttgagcctgtacgt
gaagccatcctgaacctacgggagagagtggaggacatgtgcaacgtggaactgggcaag
atcaccaagacagtgaatgacacaacattgttcaccttaggagagaaagcaaaaaaaaat
ggcggccagaagacgggagggttcaggagtttgttttctggtctgggatccaaagcaaca
acaaacaaccgtcctgcagctcccacaccgactgtctccgtggcggttcgaggtcctaac
tcacgtggtgtaggcctgcgctctcaggatgttaggagcagagaggaaccacgagctgac
agagacaggccgaggagagaggagagagaaccagccagagaggcagccctcagaccaagc
accagatctagtcccactcagagtcggagaaagccagccagaaatagccctacccaaagt
cgaagagagacgcgcagacgcagtcccagtcccactccaagtcgtagagagtcagccaga
cccagacctactccaagtcgtagagagccagccagacccagccctactccaagtcgtaga
gagccagccagacccagccctacgcccagccggagagagacacccagaccagaacccacc
accacccctacccccagtgctgttacccaagccacccctacccccggtgctgttacccaa
gccaccccagcctcaggagctttcagccggatgggatccatagcaagtctcttccgctcc
catcgacgtgccacaccggcacctgggccagtcaacaacaacactggtggagttaaccca
tgtgagtcccgaccagagagaatgattgaggcctctagtagtcaaaaggctactagttct
cccacttaa
DBGET
integrated database retrieval system
