Oncorhynchus keta (chum salmon): 118377393
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Entry
118377393 CDS
T09424
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118377393 (khsrp)
03041 Spliceosome [BR:
oke03041
]
118377393 (khsrp)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118377393 (khsrp)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118377393 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
118377393
NCBI-ProteinID:
XP_052384090
LinkDB
All DBs
Position
10:complement(79795552..79811070)
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AA seq
673 aa
AA seq
DB search
MSDYGSPGAGAGAGGKKDAFADAVQRARQIAAKIGGDAGPPSNNGGAGGGEGFPFQTLKR
SLEDGDQPDAKKMSSQGDRDSATALSIGAQLAALSQQSVRPSTMTEEYRVPDGMVGLIIG
RGGEQINKIQQDSGCKVQIAPGEQLDSGGMPERSVSLTGNPDAIAKAKMFLDEIVSRGRG
APSSSFHESTNGQSGSMQEMMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPN
MDKPLRIIGDPYKVQQAKELVNEILRERDHAGFGDRNNFGNQMGGGGGGGGGGMDVPVPR
HSVGVVIGRSGEMIKKIQADAGVRIQFKPDDGAGPDKIAHIMGPPDRCEHAASIINELLQ
SIRVREDGGQGGPPGPPGTGGMPQGGHGRGRGQGNWGGPPGGEVTFSIPAHKCGLVIGRG
GENVKAINQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQLIEDKIEAPLCPLG
GGPGGPGPAGPMGPYNPNPYNPGPGGPGGPPHGGPPGGHGYGAPQGWGNTFQQWQAPGGP
HDPNKAAADPNAAWAAYYAQYYQQQPGGAMPGQAPNAPAAAPVQADPSQAAQTPGGQPDY
TKAWEEYYKKMGMAQPGGGAAAAPAAAVAGGGAGGQQDYSAAWAEYYRQQAAFYGPGGAP
GQAATPQQGQQAQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacggctcacccggggccggagcgggcgctggaggcaaaaaagatgctttc
gcggacgccgtgcagcgagccagacagattgcagctaagatcggaggagatgccggacct
ccaagtaacaatggaggagcaggaggaggagagggcttcccgttccaaacactgaaacgc
tctctggaggatggagaccaaccagatgccaagaagatgtcttcccagggggacagagac
tcagccactgctttgtctatcggagctcagctcgctgccctgtctcagcaaagtgtcaga
ccctccactatgacagaggagtacagagtgccagacggcatggtcggactcatcattggt
cgaggcggcgagcagatcaacaagatccagcaggactcgggctgcaaggtccagatcgct
ccaggtgagcaactagacagtggtggcatgccagagaggagcgtctccctcacaggaaac
cctgatgccatcgcgaaagccaagatgtttctggatgagattgtatctcgggggcgcggt
gctccttcctcttctttccacgagtcgaccaatgggcagagtggctccatgcaggagatg
atgatcccagctggcaaggccggcctaatcatcggcaagggaggagagaccatcaaacaa
ctacaggagcgtgctggagtgaagatgatcctcatccaagatggttcccagccacccaac
atggacaaacccctgcgcatcatcggagacccctacaaagtacagcaagccaaggagctg
gtgaatgagatcctgagagagagggatcacgctggctttggagacagaaacaattttggc
aaccaaatgggaggaggaggaggtggtggtggaggaggcatggatgtgcccgtgccccgc
cactctgtgggagttgtgattggtcgaagtggagagatgatcaagaagatccaggcagac
gctggagttaggatacagttcaaaccagatgacggtgcaggtcctgataagatagcccac
atcatgggccctccagaccgctgtgagcatgctgcctccatcatcaacgagctgctgcag
agcatcagagtcagggaggacggagggcaggggggtcctccaggtccacctggcacgggg
gggatgcctcagggtggccatggcagggggcgaggccagggcaactggggcggtcctccg
ggaggtgaggtaaccttctctatccccgcccacaaatgcggcctggtgattggtcggggt
ggcgagaatgtcaaggccatcaaccagcagacgggggcttttgtggagatctcgcgtcag
ccgccgcccaacggggaccccaacttcaaactgttcatcatcagggggtcccctcaacag
atagatcacgccaagcagctcatagaggacaagatcgaggctcctctgtgtcctctaggg
ggaggtcctgggggacctggtccagctggtccaatgggcccctataaccccaacccttac
aacccagggcctggtggccccggaggaccccctcatggcggccccccaggtggtcatggt
tatggggcccctcagggctggggaaacaccttccagcagtggcaggcccctggaggacca
cacgaccccaacaaggcagcagcagaccccaatgcagcgtgggcagcctactatgcgcag
tactaccagcagcagccagggggcgccatgccgggccaggcccccaacgccccagcagcc
gccccagtccaggcagacccctcccaggcagcccagacccctggaggccagccagactac
accaaggcctgggaggagtattacaagaagatgggcatggcccagcccggtggaggtgct
gcagcagcgccggctgcagccgtggccgggggaggagcgggcggacagcaggactacagt
gcagcctgggctgagtactataggcagcaggcggccttctacggccctggaggggctccg
ggacaggctgccaccccacagcaaggacaacaggcccagtga
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integrated database retrieval system
