Oncorhynchus keta (chum salmon): 118377410
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Entry
118377410 CDS
T09424
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118377410
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118377410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
118377410
NCBI-ProteinID:
XP_035620201
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All DBs
Position
17:complement(45369213..45371890)
Genome browser
AA seq
447 aa
AA seq
DB search
MAYPQGFLFQPSVSLALHSCPPFSSSVILGRPRTDEMGRPSTGSAFAPYAGSPAFNGTSP
GFNSYLQYSGEQRAAMNSFVGSAYDPSAGITGSLEYHPFGGALGPYPYGDPAYRKNATRD
ATSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWNPRN
RSEDEEEDDNIDLEKNDDDDEPLKPTAEIGLKNEGDGHHPHPVGISREKEDNSSNDMEPV
LTDPDLKDHGDRRVPEMLGPTTTASPQNVHLGAERDSDSADTSSPPAPRRNDTGNSSNAT
SVIDSPLPAPKPKLWSLAEIATSSDKCKGCSDGAQNVSRQLRTEIPASVSSPPRAAPQNH
FPHSAALSRHVYYTSPFFQGYSNYHGAFGQLHSPGSNVGSATHLNGLHQTMLHRAEALAR
DSKARSQTQIDLCKDLRYELKKGMTHV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcaaggctttctcttccaaccgtcggtttctctggctctccattcctgt
cccccgttcagttccagtgtgattttaggaagaccgaggacagatgaaatgggccggccg
tctacaggctcagccttcgcgccgtacgcgggatcaccggcgttcaatggcacgtcgcca
ggcttcaactcttaccttcagtacagcggagagcagagggcggcaatgaactcgtttgtg
ggttccgcgtatgatccttcagccggcatcactggctctttagaatatcacccgtttggt
ggtgcattgggcccctatccatatggcgaccctgcatacaggaaaaatgctacacgggat
gcgacttccactctcaaagcgtggctcaatgaacatcgcaaaaacccttaccccaccaag
ggcgagaagatcatgctggcaatcatcaccaagatgacccttacccaagtgtccacctgg
ttcgctaacgccagaagacgtttgaagaaagagaacaaaatgacgtggaacccgaggaat
agaagtgaggatgaggaagaggatgacaacattgacctggaaaagaatgacgacgacgac
gagccactcaagccaacagcagaaattgggttaaaaaatgaaggagatggacatcatcca
catccagtgggaatctcccgtgagaaagaggacaatagcagcaatgatatggaacctgtc
ttaactgatccggatttaaaggaccacggggacaggagagtgcccgagatgctgggaccc
actaccacagcatctcctcaaaacgtgcaccttggagcggagagggattcagactcggcg
gacacgtcaagtccacctgcaccgaggcgtaatgacacaggcaactccagcaatgccacg
tcagtgattgactcgccccttccagccccaaaaccaaaactgtggtcgctggcggagatt
gcaacttcttcggacaaatgtaaaggatgtagcgatggtgcccagaacgtgtcccgacaa
ttgcgcacagagattccggccagtgtgtcatctccaccgcgagccgctcctcagaatcat
ttccctcacagcgcagccctttcaagacatgtctattatacgtctccctttttccagggt
tactcaaactatcatggcgcttttggacagctgcacagccccggatccaacgtggggtca
gcgacacatttaaatggattacatcaaactatgttacacagagccgaggcactggcaaga
gatagcaaagccaggagccaaacacagatagatctttgtaaagacttgagatatgaactt
aagaaaggtatgacacatgtttag
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