Oncorhynchus keta (chum salmon): 118377433
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Entry
118377433 CDS
T09424
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118377433
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118377433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118377433
03009 Ribosome biogenesis [BR:
oke03009
]
118377433
04131 Membrane trafficking [BR:
oke04131
]
118377433
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118377433
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118377433
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118377433
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118377433
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118377433
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118377433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
Sigma54_activat
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
118377433
NCBI-ProteinID:
XP_035620234
LinkDB
All DBs
Position
25:22288410..22299213
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLNDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWGDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSQGTGGTGGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagaatccaaaaatgatgatctttccactgcgattctgaagcagaag
accagacctaacagattgattgttgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctgtttcgtggagacacagtgctgatgaag
gggaagaagcgcagggagtcagtatgtattgttttgtctgacgacacctgctctgatgag
aagatccgcatgaaccgtgtggtccgcaacaacctccgcgtccgtctgggggatgtcatc
agtatccagccgtgtcctgatgtgaagtatgggaagaggatccacgttctgcctattgat
gataccgtggagggaatcactggcaatctatttgaggtctacctcaaaccctacttccta
gaggcctacaggcccatccgcaagggtgatatcttcctggttcgggggggtatgcgtgcg
gtggagttcaaggtggtggagactgaccccaacccctattgcatcgttgcccccgatacc
gtcatccactgcgagggagagcctatcaggagagaggatgaggaggagtccctgaatgag
gtgggctatgacgatatcggaggagtgaggaagcagctggctcagatcaaggagatggtg
gagctgccactcagacaccctgcactattcaaggctataggagtcaagcccccccgtggt
atcctgctgtacggaccccccggtacaggaaagaccctgattgccagagctgtcgctaat
gagactggagccttcttcttcctcatcaacgggcctgagatcatgagtaagctggctgga
gagagtgagagcaacttgaggaaggccttcgaggaggctgagaagaactctcctgccatc
atcttcattgatgagctggacgctatcgctccaaagagagagaagacccatggagaagtg
gagaggcgtatcgtgtctcagctgctgaccctgatggacgggctgaagcagagggctcat
gtcattgtcatggcagccaccaacagacccaacagcatagacgctgcacttaggagattt
gggcgttttgacagggaggtggacattggaatccctgatgctacaggcagactggaaatc
ctgcagatccacaccaagaacatgaaactgaatgacgatgttgaccttgaacaggtggct
aatgagacccacggccacgtgggtgctgacctggctgccctgtgctctgaggctgctctc
caggccatcaggaagaagatggacctaatcgacttggaggacgagaccatcgatgcggag
gtcatgaactccctggccgttaccatggacgacttcaggtgggctctgagccagagtaac
ccatcagctctgagggagacggtggtagaggttcctaacatcacctggggggacattgga
ggactggaagatgtcaagagggagttgcaggaactggtgcagtacccagtggagcaccct
gataagttcctgaagttcggtatgaccccgtctaagggagtgttgttctacgggcccccg
ggttgcggtaagaccctgctggccaaggccattgccaacgagtgccaggccaacttcatc
tccatcaaaggacctgagcttctcaccatgtggttcggagagtctgaggctaatgtcagg
gagatctttgacaaggctcgccaggcagccccgtgtgtgttgttctttgacgagctggac
tccatagcgaaagcccgtgggggtaatgtgggagatggtggcggagcggccgaccgtgtc
atcaaccagatcctgactgagatggacggcatgtccagcaaaaagaacgtcttcatcatc
ggcgccaccaatcgccctgacatcattgaccctgccatccttcgacccggccgtctggac
cagcttatttacatccctctgcctgacgagaagagcaggatcaacattctcaaggctaac
ctccgaaagagccccattagcaaggatgttgatctggacttcctggctaagatgaccaat
ggtttctcgggtgctgaccttacagaaatctgtcagcgggcctgtaagctggccatcaga
gagtgcatcgagaacgagattcgccgagagagggagaggcagaccaacccttctgctatg
gaggtagaggaagatgaccctgtgccagagatcaggaaggaccactttgaggaggccatg
cgattcgcccgccgctccgtcagcgacaatgacatccgcaaatacgagatgtttgcccag
acactgcagcagagccgaggctttggcagcttcaggttcccatccagtgctgcagggggc
agtggtccaagccagggtaccgggggaacaggcggggggccagtgtttaacgaggataac
gatgacgacctgtatggatag
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