Oncorhynchus keta (chum salmon): 118377448
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Entry
118377448 CDS
T09424
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
oke04261
Adrenergic signaling in cardiomyocytes
oke04382
Cornified envelope formation
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118377448
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118377448
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
118377448
09158 Development and regeneration
04382 Cornified envelope formation
118377448
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118377448
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118377448
03036 Chromosome and associated proteins [BR:
oke03036
]
118377448
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118377448
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118377448
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118377448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
DSE1_N
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
118377448
NCBI-ProteinID:
XP_052343771
LinkDB
All DBs
Position
30:15488014..15552032
Genome browser
AA seq
443 aa
AA seq
DB search
MEEETDNPKINNSFLRDHNYATEADIISTVEFNPSGELLATGDKGGRVVVFQREQETKSE
PQRRGEYNVYSTFQSHDPEFDYLKSLEVEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKI
RERDRRPEGYNLKDEDGRIRHPSTITSLRVPVLQNSDLMVEATARRVFSNAHTYHINSIS
VNSDFQTYISTDDLRVNLWNLEITDQSFNIVDIKPCNMEDLTEVITAAEFHPQQCNTLAY
SSSRGSVRLCDMRKQALCDTHCKFFEEPEDPSTRSFFSEIISSISDIKFSHSGRFLMTRD
YLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNN
FFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILHSTW
HPQENIIAVAASNNLYIFQDKVT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagactgacaaccccaagatcaacaacagcttcctacgcgaccacaactat
gccacagaagctgacatcatctccacggtggagtttaacccttcaggggagctgctggcc
acaggggacaaaggaggaagagtggtggtcttccagagagaacaggagactaaaagcgag
ccccagaggcgaggggagtataacgtgtacagtacgttccagagtcatgatccagagttt
gactacctgaagagtctggaagtagaggagaagatcaacaagatcagatggctgccacag
cagaatgctgcttacttcctcctctccaccaacgataagacagtgaagctctggaagatt
cgtgagagagacagacgaccggagggatacaacctgaaggatgaagacggacgaatcaga
cacccatccacaatcacctcactacgggtgcctgtcctccagaactcagatctgatggtt
gaggcaacagcgcggcgtgtgttcagtaacgcccacacctaccacatcaactccatctcc
gtgaactccgacttccagacctacatctccacggatgacctcagggtcaacctgtggaac
ctggagatcactgaccagagcttcaacatcgtggacattaagccgtgtaacatggaggat
ctgacggaggtgattactgcagcggagtttcatcctcagcagtgcaacaccttggcttac
agcagcagtagagggtcagtacgactctgtgacatgaggaaacaagcgctctgcgacaca
cactgcaagttctttgaggagccagaggacccctccactcgttcatttttctcagagatc
atctcttccatctcagacatcaagtttagtcatagcgggcgcttcttgatgacacgggac
tacctgacggtcaaggtgtgggacctcaacatggagaccagaccggtccagacataccag
gtccatgactacctgaggggtaagctgtgttctctgtacgagaacgactgcatcttcgac
aagtttgagtgtgtctggaacgggtcagacagtgtcattatgacggggtcatataataat
ttcttccggatgtttgatcggaacaccaagaaagatgtgactctggaggcttccagagag
aacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgtgggagggaagcgtcgt
aaagacgaggtgactgttgacagtctggacttcagtaagaaaatcctccactccacctgg
cacccacaggaaaacatcatcgccgtggcagccagtaacaacctttacatcttccaggac
aaggtcacctag
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