Oncorhynchus keta (chum salmon): 118377512
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Entry
118377512 CDS
T09424
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118377512
Cilium and associated proteins [BR:
oke03037
]
Other cilia and associated proteins
Stereociliary proteins
118377512
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
118377512
NCBI-ProteinID:
XP_035620332
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Position
31:complement(20691392..20700946)
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AA seq
257 aa
AA seq
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MVSALARLLLITCVILPFHGAEKLRKALDRKDVEYEKCTGNDADKPNCTRIAAESDSRTS
YLNNMYNSCPQGPAGTPGREGNPGTNGIPGTPGIPGRDGIKGEKGECVSEVFEEPWKPNY
KQCAWNSLNYGIDLGKIADCTFTKLRSDSALRVLFSGSLRLKCKTACCQRWYFTFNGAEC
TGPLPIEFIIYLDQGSPELNSTINIHRTSSVEGLCEGIRAGLVDVAIWVGTCADYPRGDA
STGWNSVSRVFIEELPK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggtatcagctctagctcgtctgctgctcatcacctgcgtgattctacctttccatgga
gcagagaaattgagaaaggcacttgacaggaaggatgttgaatacgaaaagtgtactgga
aacgatgcagacaaaccaaactgcaccagaatcgctgctgaatccgattcaagaacctct
tatttgaacaacatgtacaacagctgcccccagggtccggctggcacccctggcagggag
ggtaaccctggcaccaatggcatccctgggacccctggcatcccggggcgcgatggcatc
aagggggagaaaggagagtgtgtgagtgaggtgtttgaggagccctggaaacccaactac
aagcagtgtgcctggaactcactcaactatgggatcgacttgggcaagatagctgactgt
acattcaccaagctgcgttcagacagtgccctgcgtgtgctcttcagcggctccctgagg
ctgaagtgtaagacagcctgctgccagcgttggtacttcaccttcaacggagctgagtgt
acaggacctctgcccatcgagttcatcatctacctcgaccaaggcagccctgagctcaac
tccaccatcaacatacacagaacctcatctgttgaagggttgtgtgaggggatccgggca
ggcctggtggacgtggctatctgggtggggacctgtgctgactaccccagaggagatgca
tctacagggtggaactctgtatccagggtcttcatagaggagctgcccaaatga
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