Oncorhynchus keta (chum salmon): 118377554 Help Entry 118377554         CDS       T09424                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke03430   Mismatch repair Brite KEGG Orthology (KO) [BR:oke00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     118377554 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oke03400]     118377554 (msh6) DNA repair and recombination proteins [BR:oke03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      118377554 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  118377554 NCBI-ProteinID:  XP_035620375 LinkDB All DBs Position 24:complement(21380413..21413621) Genome browser AA seq 1390 aa AA seqDB search MAKQSSIFNFFNKSPPPVLKAKPSPSPAEADLPSSVRKKNSSPKEEAKHASQTPTTKKTP AKPLNAKASKGGFGKLFANKTLTIKESPAPCPFSAGALVWAKLEGHPWWPCMVVPQPVGG QQMRGRGKSQRLHVHFFDEPPTRGWVSTKYIREYQGSDSSEAKTGGVFFSGKPVIRKAME LADAAMPESPQTRLKMPVCMDPSDAEEDEEEDMELDKSTLTDEDLTEEEDEETVKSKPSR RSSRATAEQGSKSKRRRIVVASDSEGSGDEFKPEQAGCSSEEDEEEVVNSMSEEDVESEC EAEPDSPVKPVKRKRPVEKPSSAKPKPKTPTLPETAKRAPLSSTFTADTKSRLSAFSAPE SFDSQANGSGAGGQGGATVWDHEKLDWLQEGRRKDAKRRRQSEEDYDPTTLYVPEDFLNK TTPGMRRWWQLKSETFDAVLFFKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIG FGRFSDGLVQRGYKVARVEQTETPDMMEARCKTMLKPTKFDRVVQREVCRIITRGTQTYS VLDGAPSETHSKYLLSIKEKAEEESSGRCRTYGVSFVDTSVGYFYVGQFQDDRHCSRLRT LLSHYTPAQVLFEKGNPSAETRKIFKASLSSAMQEGLTAGSQFWDAQKTLKTLAEEDYFK ESVRKDEESESSVLPSVLKSMTSESDSLGLTPKEGYELALSALGGCMFYLKKCLVDQELL SMTNFQEYIPVDVAMEKAAGPTSFFSQTRQRMVLDGVTLANLEILQNVSGGTEGTLLERL DTCSTPFGKRLLKQWLCSPLCNPTSIGERLDALEDLMGVQAQATEVSDLLKNLPDLERLL SKIHSIGTPKGQDHPDSRAVLYEEVTYSKKKIADFLSALEGFKTMQEIVTILGPVAVDFR SRLLRQVVNLKDDGQEGLFPDLSAELKRWDTAFDHQKARATGVITPKTGFDPEFDQALSG IKACERDLQDYLDRQKKRLGCRNLTYWGTGRNRFQMEVPDSVSERNIPEEYKVKSTKKGW KRYWTREIERLFSELQSLEEKRDAALKDCMRRLFYNFDKNYRDWQTGVECMAVLDVLLSL TRYSQGGDGGPMARPQVLLPGDISQSAAFLDLRGSRHPCVTKTFFGDDFIPNDIAIGCPG GEEEGQEEGQEDKGHAPCVLVTGPNMGGKSTLMRQCGLVVVLAQLGCYVPAESLSFTPVD RVFTRLGASDRIMAGESTFFVELSETASILHHGTKHSLVLLDELGRGTATYDGTAIASAV VNELAKRICCRTLFSTHYHSLVEDYTNNPAVRLGHMACMVENEGDEDPSQETITFLYKFI AGACPKSYGFNAARLANLPEDVIQSGHRKAKEFERSTISLRVFKKLCLYAEDPTAASTQF ALLLQMISNL NT seq 4173 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagcagcattttcaactttttcaataagtctccgccaccggttctgaag gcgaaaccgagtccctcgcctgcagaagccgacttgccatcctcagttcgaaaaaagaac agctctccaaaagaagaagctaagcatgcatctcaaactcccaccaccaaaaagactcct gcaaaaccccttaatgcgaaagcgagcaaaggcggattcggcaaactctttgcgaataag acactaacaataaaggagagtccagcaccatgtccattcagtgctggagccttggtgtgg gccaagctagaggggcacccctggtggccgtgtatggtagttccccagcctgtcggcggg cagcagatgaggggtaggggtaaaagccagcgcctgcatgtccacttcttcgatgagcca ccgaccagaggctgggtcagcaccaaatatatccgcgagtatcaaggctcggacagcagt gaggctaagacaggaggggtgttcttcagtggtaagcctgtgatccgcaaggccatggag ctggctgatgctgctatgccagagagcccacagactagactgaagatgcctgtctgtatg gacccatctgatgctgaggaagacgaggaggaggatatggagcttgataagtcaacattg accgacgaagatttaactgaagaggaagatgaggagacagtgaagtctaagcctagtcgc cgttcctcccgtgccacagcagaacagggcagcaagtccaagcgtcgccgcatcgtggtt gcctccgacagtgaaggctcgggtgacgaattcaaaccagaacaggccggatgcagcagt gaggaagatgaggaagaggtagtgaacagtatgtcggaggaagatgtagaaagtgaatgt gaggctgaacctgacagcccagttaaaccggtgaaacgcaaacgacccgtagagaagcca tccagtgccaaaccaaaacccaagactcccactcttccagaaaccgccaagagagccccc ttatctagcaccttcacagccgacacaaagtctcgactctcagccttttcggccccggag agcttcgacagccaggcgaatggctcaggtgccggcgggcaaggtggggctacggtatgg gaccatgagaagcttgattggctacaggaaggccggaggaaagacgccaagagacggaga cagtctgaggaagactacgatcccacgactctgtatgtcccagaagacttcttgaacaaa acgactccaggcatgcggcgctggtggcagctcaagtcggagacgttcgatgccgtgctc ttcttcaaggtgggtaagttctatgagctgtaccacatggatgctgtgattggtgtcaac gagctgggtctgaccttcatgaagggggcctgggcccactctggcttccccgagataggc tttggacgcttctcagatggactggtgcagaggggatacaaggtggcacgtgtggagcag acggagactccagacatgatggaggctcgctgtaagaccatgctgaagcccaccaagttt gaccgggtggtacagcgtgaggtatgccgaatcatcacacggggaacgcagacctacagt gtgttggacggagccccttctgagacacacagcaaatacctcctcagcatcaaggagaag gcagaggaggaaagttcagggcgctgcaggacctatggggtcagcttcgtggacacatct gtagggtacttctatgtgggccaattccaggacgaccgacactgctcccggctccgcacc ctgttgtctcactacacccctgcacaggtgctctttgagaaggggaacccttcagccgaa acccgtaaaatcttcaaggcttctttgtcctcggctatgcaggaggggctgactgcaggc tcccagttctgggatgcacagaagaccctgaagaccctagctgaagaagactactttaaa gagagtgtgaggaaggatgaggagtctgagagcagtgttctcccctctgtcctcaaatcc atgacgtctgagagcgactcgttgggtctgacccctaaggaggggtatgagttggctctg tcggccctgggaggctgtatgttctacttaaaaaaatgtctggttgaccaggagctgctg tccatgaccaacttccaggaatatatcccagtggatgtggcgatggagaaggcagccggg ccgaccagtttcttctcccagacccgtcagcgtatggtcctggatggggtgacactagcc aacctggagatcctgcagaatgtgtcggggggtacagaggggaccttgttggaacgcctg gatacctgtagtactccatttggtaaaaggttgctgaagcagtggctctgttccccgctc tgtaaccccacatccataggggaacgcctggatgccctggaggacctgatgggagtgcag gcccaggctacagaggtctcagacctgctcaaaaatctccctgatctggagaggctcctt agtaagatccacagcatcggtactccgaagggtcaggaccacccggacagcagggctgtt ctgtatgaagaggtcacctacagtaagaaaaagattgcggacttcctctcggctctggag ggcttcaagaccatgcaggagattgtgaccatactaggaccggtcgcggtcgacttccgg tccaggctgctgcgccaggtggtcaacctgaaggatgatggtcaggagggcctcttccct gacctgtcggccgagctgaaacgctgggacacagccttcgaccaccagaaggcccgcgcc accggagtcatcacccctaagactggctttgacccagagtttgaccaggctctcagcggc atcaaggcctgtgagagggacctacaggactacctggacaggcagaagaagaggctgggc tgcaggaacctgacctactgggggacgggacggaaccgctttcagatggaagtaccagac agtgtctcggagaggaacattcctgaggagtacaaggtgaagtctactaagaagggctgg aaacgctactggaccagggagatagagcgtctgttctcagagctccagagtcttgaggag aagagagacgcagctctgaaggactgcatgagaagactcttctacaactttgacaagaac tatagggactggcagactggggtggagtgcatggctgtgctagatgtgttactgagtctg acacgatacagccaggggggtgatggaggaccaatggcacggcctcaagtactacttcct ggtgacatcagccaatcagcagccttcctggacttgaggggctcccgccacccctgtgtc accaaaaccttcttcggtgatgacttcatccctaatgacattgctattgggtgccctggc ggcgaggaggagggccaggaggagggccaggaggataaaggacatgcaccctgcgtgctg gtcactgggcctaacatgggaggaaagtcaactcttatgagacagtgtggtctggtggtg gtcttggcccagttgggttgctatgttcctgctgagagcctgtcctttacccctgtggac agagtcttcacccggttgggagcatcggaccgtatcatggctggggagagcaccttcttt gtagagctcagtgagactgcaagtatcctccaccatgggaccaagcactccctggtgctg ctggatgaactgggaaggggcacagccacatatgacggcacagcgatagccagtgctgtg gtgaacgagctggcgaaaaggatctgctgtcggaccctcttctccacacattaccactcc ttagtagaagactacaccaacaaccctgctgtacggctcggacacatggcctgtatggtg gagaatgagggagatgaggaccctagtcaggagaccatcaccttcctctacaagtttatc gcgggagcttgtcctaaaagctacggtttcaacgctgcacgcctcgccaacctgcctgag gatgttatacaatcaggccacaggaaggccaaggagtttgagaggagcaccatttcccta cgagtcttcaagaagctgtgtttgtatgctgaagaccccacagcagccagcacacagttt gccttgctcctccagatgatcagcaacctgtga

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