Oncorhynchus keta (chum salmon): 118377639
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Entry
118377639 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118377639
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118377639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
zf-CW
NAD_binding_8
SWIRM
Thi4
DAO
HI0933_like
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Lycopene_cycl
FAD_binding_2
Pyr_redox
GIDA
2-Hacid_dh_C
Pyr_redox_3
AlaDh_PNT_C
KARI_N
NAD_binding_9
FMO-like
TrkA_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
118377639
NCBI-ProteinID:
XP_052328702
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Position
20:complement(35793712..35812871)
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AA seq
837 aa
AA seq
DB search
MLTDADYTVNASGARRAKKRTAMESSSGDGQSSLRSSGRQVNVRMKRCNNPPPGQTKRKA
TDTEEEEDQSEKKYRKCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECF
DHYYRSHKDGYETYASWKRVWTGNGKSEPSLKAFMADQQLPYWVQCTKPDCGKWRQLTKE
IQLTASLAATYRCGMKVNNVKTEGPDQCSLPEDLRVAEVIDSWWHSMLILPPLFKDSPAN
PFLTAYYPDCVGMSPSGSTSNHSHAELRAEHCRAIPPQIPGLCPYFQPFYQPNECGKALC
VRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRGCKEVLTPQNCAPHIIVRGLVRV
RCVQEMDRVLLFMTRKGLINTGVLSVKQPLLPERYHNKNVIVIGAGASGLAAARQLQNFG
MQVVMLEASERIGGRVWDDTSLGGVTVGRGAQIVNGCVNNPIALMSEQLSIKMHKLGERC
DLFQEGGSATDPAIDKRMDFHFNAILDVVSEWRKDKSQNQDTPLGEKIQEVYKTFLQESG
VQFSQLEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHTLLTEGYSSVLNK
LAEGLDIRIKSPVQAIDYSGIXSKLPHPMAFIWSFFKVLVTIPLTLLQKNIIQFNPPLPE
RKLKAIHSLGAGLIEKVALQFPFRFWDGKIQGADYFGHIPPSPDKRGMFGVFYDMDPQGK
RSVLMSVISGEAVPSIRDMEDKDVADQCMKVLRELFKEQEVPDPVNYFVTRWSRDMWSQM
SYSFVKTGGSGEAYDIIAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagatgcagattatacagtgaatgcttcaggtgctcggcgtgccaagaagagg
acagcaatggagtcatcatctggggatggtcagtcgtcccttcgctcctctggtagacag
gtcaacgtcagaatgaagcgctgcaataatcctccacctggacagactaaaagaaaagcc
actgacacagaggaagaagaggaccaatctgagaagaagtacagaaagtgtgaaaaggct
ggatgctcggccacatacccagtgtgctttgctagtgcctctgaaaggtgcgccaaaaac
ggctacacttctcggtggtaccatttgtcctgtggggagcacttttgcaatgagtgtttt
gatcactactatagaagtcacaaagatggctatgaaacatatgcatcctggaagagggtt
tggactggcaatgggaagagtgagcccagtctgaaagctttcatggcagatcaacagctt
ccatactgggtccaatgcactaagccagactgtgggaaatggcgtcagctaaccaaggag
atccagctcactgcctcactagcagccacgtatcgctgtggcatgaaggtcaacaatgtc
aagaccgaagggccagaccagtgctctctgccagaagatttgagagtggcggaggtgatc
gacagctggtggcattccatgctgatcctgcccccgttatttaaggacagcccggccaac
cctttcctcacagcctactatcccgactgtgtgggcatgagcccctcaggatccaccagc
aaccactctcatgctgagttgagggcagagcactgcagagccatcccaccacagattcca
gggctgtgtccatacttccagcccttttaccaacccaacgagtgtgggaaggccttgtgt
gtgcgaccggacatgatggagctggatgagctctacgagtttccagagttttcccgtgac
cccaccatgtacctggccctgcgtaaccttatcctggcctcctggcacagaggctgtaag
gaggtgctgacaccccagaactgtgctccccacatcattgtgagaggtctggtacgtgtg
cgttgtgtacaggaaatggacagggtgcttctcttcatgaccaggaagggtctgatcaac
actggggttctatcagtcaaacagcccctgcttcccgagcgctaccacaacaagaacgtg
attgtgattggagccggggcgtcggggctggctgctgcgcggcaactgcaaaactttggc
atgcaggtggtgatgctcgaggcgagtgagcggattggagggcgggtgtgggacgataca
tcgctgggcggcgtcactgtgggtcggggggctcagattgtgaacggctgtgtgaacaac
ccaattgcactgatgagtgagcagctcagcattaaaatgcacaagctgggggagaggtgt
gacctgttccaggagggagggagtgccacagacccggccatcgataagcgcatggacttc
cactttaacgccatcctggatgtggtgtcagaatggaggaaagacaagtctcagaaccag
gacactcctctgggagagaaaatccaggaggtgtacaagacattccttcaggagtctggg
gtccagttcagccagctggaggagaaagtgcttcagttccatctcagcaacctggaatat
gcctgtggaagcacactggaccaggtgtcggctcgatcctgggaccacaatgagttcttc
gctcagttctcaggagaccatacactgctgacagagggctattcgtctgtgcttaataaa
ctggccgagggcctcgacatccgcatcaagagcccggttcaagctatcgattactcaggg
atatagtcaaagttacctcatccaatggcatttatttggtctttttttaaggttctggtg
acaatcccattgactttactccagaagaatatcattcaattcaaccctcctcttcctgag
agaaagctgaaagctatccacagtcttggagcaggtctcattgaaaaggttgctctgcag
ttcccgtttcgcttctgggacggaaagatccaaggagcagattactttggccacattcca
cccagtcctgacaagagagggatgtttggtgtgttctatgacatggatccacagggaaaa
cggagtgtcctgatgtccgtaatcagtggtgaagctgtaccttctatcagggacatggag
gacaaagatgtcgctgatcagtgcatgaaggtgctgcgtgaactcttcaaagagcaggag
gtccccgatccggtgaattactttgtgactcggtggagcagagacatgtggtctcagatg
tcatacagcttcgtgaagacagggggcagcggggaggcctatgacatcattgctgaagat
gtgcaaggaaaggtgttctttgctggggaggcgaccaacaggcactttcctcagacggta
acaggagcctatttgagtggcgtccgagaagcaagtaaaatagctgccttgtaa
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