Oncorhynchus keta (chum salmon): 118377706
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Entry
118377706 CDS
T09424
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118377706
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118377706
04091 Lectins [BR:
oke04091
]
118377706
Proteoglycans [BR:
oke00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
118377706
Glycosaminoglycan binding proteins [BR:
oke00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
118377706
Lectins [BR:
oke04091
]
C-Type lectins
Lecticans
118377706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
EGF_TEN
I-set
Motif
Other DBs
NCBI-GeneID:
118377706
NCBI-ProteinID:
XP_052371911
LinkDB
All DBs
Position
Unknown
AA seq
1830 aa
AA seq
DB search
MTRWIVLLCVCLSVTSATFNNYQQISSYEEHSFLDPEDTLSVSVPLELPQRPLLGSTLVL
PCYFQDHTVHDPGAPTIAPLSHRIKWSRITKERVSVILVAMDGEVKVEEDYLDRVHMVGY
PQTPTDASIKITELRSNDTGTYRCEVQHGIEDNHDTVDVLVQGIVFHYRAITTRYTLTFE
KAKAACIQNSAVIATPEQLQAAYDDGFHQCDAGWLSDQTVRYPIHDPRENCYGDKDEFPG
VRTYGVRDVNETYDVYCFAEKMSGSVFYSGSVAKFTYSEAEEQCSKQGALLATTGQLYLA
WQAGLDVCNAGWLGDRSVRYPINVRRPQCGGGLLGVRTVYLHVNQTGYPLPESRYDAYCY
TETDEEGSGMVVPTEAGSGVLSVATVTQGPPEVFFRNMTTESEALGEGLATQKPTGVDFT
FGTELPLPQPPSVTELPQPPSVTELPLPQPPSVTELPLPQPPSVTELPLPQPPSVTELPL
PQPPSGTELVVDVVGRVTARPDVGSEIGEVSRSGYLFSATGVVFHYRAGSSRYAFTFVEA
QLACQSVGASIATPEQLQAAYEAGYNQCDAGWLLDQTVRYPIVSPLEKCSGDLETLPGVR
TYGLRPAEEHYDVYCYVDRLRGDVFHAGSSEGFTYDGALAHCQELNATLASTGQLYAAWR
QGLDKCRAGWLIDRSVRYPITNPRAACGAGKAGVYTVYTHNNQTGYPDLYSRYDAYCFKV
DILFVANETGLNITEIEEALVNLTSITDLLRPVLPSITPPISVESSGSGSGASGASGSSG
DLSGDHSGELPHSGDLSGSGDLSGSGSTEIPSGSSGLSSGDASGSGLSGDGSGITVTSGR
GSVLSGLGSGGPQEAGEGITVTFSSGSGSVLSGLGSGGPQEAGEGITVTFSSGSGSVLSG
LGSGGPQEAGEGITGILTFPTEMGLGMFSGSGFLSGSGSGSGVSSEESGSSSDSSSSSGE
SGELSGMSSGSSSSSSEEFSGFPSGFFPSGGSSGHSGEESGSGDTQVLLIDGKLVEVSTS
HTHKEKELGGGGLEFSGSGSDSSGSGFFPSVTFLGSGFTDLTGSASGEQEASGSLHYGSG
SGDISGSASGSSGSGLFPSVTFLGSGFTDLTGSASGEQEASGSLHYGSGSGDISGSASGS
SSSSGFFPGVTFLGSGFTDLTGSASGEQEASGSLHYGSRSGDNSGSDSGSSGSGSFPGVT
FLGSGFTDLTGSASGEQEASGSLHYGSGSGDISSSDSGSSGSGFFPSVTFLGSGFTDLTG
SASGEQEASGSLHYSSGSGDISGSASGSSGSGFFPGVTFLGSGFTDLTGSASGEQEASGS
LLYGSRSGDNSGSDSGSSGSGSFPGVTILGSGFTDLTGSASGEQEASGSLHYGNGVGRGG
YASGFGTSGFPSGDMSGISRSSTSDEEDSSVTFLTNDVITEVSKATTVSMELGAGPVQFS
GQGSGSHTWSGADHPTQASGVSSGAHSGDLLPAVLSSPPSNRELMEGTEGPEEAMAELGE
TTREFYVTFAPDLAPAGLAAPAISLQTPAVMEKPSSEEGIPDPCDPNPCGAGSCSVEDGV
GLCQCPPGKVGEGCQYEVDVCHSNPCANGATCVENADSYKCLCLPSYGGDRCEIDEQDCE
EGWTKFQGNCYLHFPERETWLQAEQRCRDLSAHLVSIITPEEQHFVNSNGQDYQWIGLND
KTVENDFRWIDGTPLQFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCK
TGPVYCGAPPEVENAKMFGSRREQYTVGSIIRYQCNPGLLQRHLPVVRCMADGQWEKPQV
ECLGAVPSPSNRIQRRSIRRRGESTSSKRH
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggtggattgtattactttgtgtttgtctgtccgtcacctcggcaacattcaac
aattatcagcaaatcagcagctatgaggagcactcctttctggaccctgaggacacactg
agtgtgagcgtccccctggagctgcctcagcgccctctactgggcagcaccttggtacta
ccctgttacttccaggaccacaccgtccacgaccccggcgcccccaccattgcccccctg
tcccaccgcatcaaatggagccgcatcaccaaggagcgtgtctctgtcatcctggtggcc
atggacggagaggtcaaggtggaggaggactatctggaccgggtccacatggtgggctac
ccccagacccccactgacgccagcatcaagatcacagagttgaggtccaacgacaccggc
acctaccgatgtgaggtccagcacggcatcgaggacaaccatgacactgtggacgtcctg
gttcaaggtatcgtgtttcactaccgggccatcacgacacgctacactctgacctttgag
aaggccaaggcagcctgtatccagaacagtgctgtgatcgcgaccccagagcagctccag
gccgcgtacgatgacggcttccaccagtgtgatgccggctggctctctgaccagactgtc
aggtacccaatccatgatccacgtgagaattgctatggcgacaaagacgagttccccggg
gtgcgaacctacggagtgagagatgtcaacgagacttacgacgtgtactgttttgccgag
aagatgtcaggcagtgtgttctactctggctctgtggctaagttcacctactctgaggct
gaggaacagtgtagtaagcagggggccctgttggccaccacaggacagctgtacctggcc
tggcaggctggtctggatgtgtgcaatgcaggctggctaggagacaggagcgtccgctac
cccatcaatgtccggaggccgcagtgcggagggggtctgctgggggtacggaccgtgtac
ctccacgtcaaccagacggggtaccccctccccgaatcccgctatgatgcctactgctac
acagaaacggacgaggagggctcaggcatggtggtgcccaccgaggcgggcagcggtgtg
ctgagcgttgccacagtgacccagggtcctcccgaggtgttcttcaggaacatgaccaca
gagagtgaggcgctgggcgagggcctggccacccagaaacccactggcgtggacttcacc
ttcggcactgagttgcccctgccacagccgcccagtgtcaccgagctgccacagccgccc
agtgtcaccgagctgcccctaccacagccgcccagtgtcaccgagctgcccctaccacag
ccgcccagtgtcaccgagctgcccctaccacagccgcccagtgtcaccgagctgccccta
ccacagccgcccagtgggacagagttggttgtggatgtggtggggagagtaacggccagg
ccggatgtggggagtgagatcggcgaagtgagcagatcaggatatttattttctgctaca
ggcgtggtgtttcactaccgtgctggatctagtcgctacgccttcaccttcgtggaggcc
cagcttgcctgtcagagtgttggagcctccatcgccaccccagagcagctccaggctgcc
tatgaggctggctacaaccagtgtgatgcaggctggcttctggatcagaccgtcaggtat
cccatcgtgtctcctctggagaaatgctctggggatctggagactttaccaggagtgagg
acctatggactgaggcccgctgaggaacactacgatgtctactgctacgtggacagactc
aggggtgatgtgttccatgctggctccagtgaaggcttcacctatgacggtgctctggct
cactgtcaggagctaaacgctaccctggcctctactggccagctctacgccgcctggaga
caaggcttggataagtgccgcgcaggttggctaatcgaccggagtgtccggtaccccatc
accaacccccgggcggcgtgtggtgcagggaaggcaggggtgtacacagtatacacccac
aacaaccagacgggatacccagacctgtattccagatatgacgcctactgcttcaaagtg
gacatcttgtttgtcgccaatgaaactggattgaacatcacagagatagaagaggctttg
gttaacctcacatccatcactgatttgctgaggcctgtcctgccttccatcactcctccc
atctctgtggagtcctcaggctctggttccggggcctctggggcgagtggatcctccgga
gatctctctggtgatcactccggtgaactgcctcattccggggatctgtccgggtcaggt
gatctttcaggcagcggaagcacagagattcccagcggatcatctggtctgagtagtgga
gatgcgtccggctcggggctgagtggagacggatcaggaataacggtcacttcagggagg
ggcagtgttttatccggtttgggctctgggggtcctcaggaggctggagagggaataacg
gtcaccttctcttcagggagtggcagcgttttatccggtttgggctctgggggtcctcag
gaggctggagagggaataacggtcaccttctcttcagggagtggcagcgttttatccggt
ttgggctctgggggtcctcaggaggctggagagggaatcactgggatcctcaccttcccc
acggaaatgggattgggaatgttcagtggcagtgggttcctgtcgggatcgggaagtggc
tccggtgtcagttctgaggagagcggctcttcgtctgacagctccagcagctctggggaa
agtggggagttgtctggaatgtcgtccggctccagctctagttccagtgaggagttttcc
ggatttccctcaggattctttccctcaggaggctccagtggtcattcgggagaggagtcg
ggaagcggagacactcaggtcctgctgatcgatggtaaactggtggaggtttccacctct
cacacacacaaagagaaggagctgggtggagggggcctggaattcagcggttccggatct
gacagcagtggctcagggttcttcccgagtgtgaccttcttggggtcagggtttaccgac
ctcacagggtcagcctcaggggaacaggaggcctcggggtctctccactacggctccgga
agtggtgatatcagcggttcggcctcgggcagcagtggctcagggctcttcccgagtgtg
accttcttggggtcagggtttaccgacctcacagggtcagcctcaggggaacaggaggcc
tcggggtctctccactacggctccggaagtggtgatatcagcggttcggcctcgggcagc
agcagcagctcagggttcttcccgggtgtgaccttcttggggtcagggtttactgacctt
acggggtcagcctcaggggaacaggaggcctcggggtctctccactacggctccagaagt
ggtgataacagcggttcggactcaggcagcagtggctcagggtccttcccgggtgtgacc
ttcttggggtcagggtttaccgacctcacagggtcagcctcaggggaacaggaggcctcg
gggtctctccactacggctccggaagtggtgatatcagcagttcggactcaggcagcagt
ggctcagggttcttcccgagtgtgaccttcttggggtcagggtttaccgacctcacgggg
tcagcctcaggagaacaggaggcctcggggtctctccattacagctccggaagtggtgat
atcagcggttcggcctcgggcagcagcggctcagggttcttcccgggtgtgaccttcttg
gggtcagggtttactgaccttacggggtcagcctcaggggaacaggaggcctcggggtct
ctcctctacggctccagaagtggtgataacagtggttcggactcgggcagcagtggctca
gggtccttcccgggtgtgaccatcttggggtcagggtttactgacctcacagggtcagcc
tcaggggaacaggaggcctcggggtctctccactacggaaacggagtgggaagaggtgga
tacgcatcagggttcggaacgtcgggcttcccatccggggacatgtctggaatctccaga
tcctccaccagcgatgaggaggacagctctgtcaccttcctgactaatgacgtcattaca
gaggtttccaaggcgaccacggtttccatggagctgggggctgggccagtgcagttcagc
gggcagggaagtgggtcccacacatggagcggtgctgaccacccaacccaggctagcggt
gtctcatctggggcacactctggagatctgctccctgcggtgctgtcctctccgcccagc
aacagggagcttatggagggcacagaagggccagaggaggccatggctgagctgggggag
accaccagagagttttacgtgacctttgcccccgaccttgctcctgccggattggctgcc
ccagccatctccctgcagacccctgccgtcatggagaagccatcctcagaggagggtatc
cctgacccatgtgaccctaacccgtgtggtgctgggtcatgctcagtggaggatggtgtt
gggttgtgccagtgtccgcccgggaaagtgggagaagggtgccagtatgaggttgatgtg
tgccattccaacccttgtgccaatggagccacctgtgtggaaaatgcagactcttacaaa
tgcttatgcctgcccagctacggaggggaccgctgcgagattgacgagcaggattgtgag
gaggggtggactaagtttcagggcaactgttacctgcacttccccgagagagagacctgg
ctgcaggccgagcagcgctgccgagacctcagcgctcacctggtcagcatcatcacccca
gaggaacagcacttcgtcaactccaacggccaggactaccagtggattgggctcaatgac
aagaccgtggagaatgacttccgctggatagatggcacaccactgcaatttgagaactgg
cggccgaaccagccggataactactttaactctggagaagactgtgtggtgatgatctgg
cacgagaacggccaatggaacgacgttccctgcaactaccacctgcccttcacctgcaag
actggcccagtctactgtggcgcaccgccagaggtggagaatgccaagatgtttggcagc
aggcgggagcagtatacggtggggtccatcatccgctaccagtgtaacccaggcctccta
cagcgccacctgcctgtggtgcgctgcatggcagacggacagtgggagaagccacaggtg
gaatgcctgggcgcagtgccctcccccagtaacagaatacagcgcagatcgatcagaaga
cgaggagaatcaaccagcagcaaacgtcactaa
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integrated database retrieval system
