KEGG   Oncorhynchus keta (chum salmon): 118377707
Entry
118377707         CDS       T09424                                 
Name
(RefSeq) uncharacterized protein LOC118377707
  KO
K10840  centrin-2
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    118377707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118377707
   03036 Chromosome and associated proteins [BR:oke03036]
    118377707
   03400 DNA repair and recombination proteins [BR:oke03400]
    118377707
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     118377707
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    118377707
   Centrosome duplication proteins
    Centriole replication proteins
     118377707
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      118377707
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH Dockerin_1 SUB1_ProdP9 DUF7645 SurA_N_3 TerB LETM1_RBD DUF7390 SRI MJ1010-like_2nd MgtE_N
Other DBs
NCBI-GeneID: 118377707
NCBI-ProteinID: XP_052343636
LinkDB
Position
30:13290681..13294245
AA seq 173 aa
MATSVKRPSLGPVPPPRKKSGPKSELTEELKQEIREAFELFDTDASGHIEVKELKVAMRA
LGFEPKKEEIKRMITEADKDGTGKISFSDFLTVMTQKMAEKDSKEEILKAFRLFDDDETG
KISFRNLKRVAKELGENLTDEELQEMIEEADRDGDGEVNQGEFLRIMKKTSLY
NT seq 522 nt   +upstreamnt  +downstreamnt
atggcaaccagcgtaaagaggccgtccctaggtccggtccctccccccaggaagaagtcc
ggccccaagtcagagctcactgaggagctgaaacaggagatcagagaggcctttgaactg
ttcgacaccgacgcctccggacacattgaagtcaaggagctaaaggttgctatgagggcg
ctggggtttgagccgaagaaagaggagattaagaggatgataacggaggcggataaggac
ggaacaggaaagatctccttctctgattttctcactgtcatgactcagaagatggctgag
aaggattctaaggaggagatcctgaaagcattccgtctgtttgatgatgatgagacgggg
aagatatccttcaggaacctgaagagggtcgccaaggaactaggagagaacctgactgac
gaggaactgcaggagatgatcgaggaggcagacagggatggagacggagaggtgaaccag
ggagagttcctccgcatcatgaagaagaccagcctgtactga

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