KEGG   Oncorhynchus keta (chum salmon): 118377871
Entry
118377871         CDS       T09424                                 
Name
(RefSeq) ras-related protein Rab-33B-like
  KO
K07920  Ras-related protein Rab-33B
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118377871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118377871
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118377871
   04031 GTP-binding proteins [BR:oke04031]
    118377871
Membrane trafficking [BR:oke04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    118377871
 Others
  Specific organelles associated proteins
   Auto phagosome
    118377871
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   118377871
GTP-binding proteins [BR:oke04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    118377871
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 SRPRB G-alpha PduV-EutP ATP_bind_1 TniB Septin AAA_22
Other DBs
NCBI-GeneID: 118377871
NCBI-ProteinID: XP_035620705
LinkDB
Position
4:complement(52482290..52485499)
AA seq 243 aa
MASVESSMEFTSSLTVSSHLPPPRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPEKTEATI
GVDFREKLIEIDGETIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTSAASFRSLP
TWIEECKQHALGQEVPRILVGNKCDLQNSVQVGTDLAQQFADAHSMPLFETSAKNPSSDG
SGDSIRGSSDHVEAIFMTVAHKLKSQKPLILSQLPRGVLAGDTVTLIRGRDEGEEKVSWT
CSC
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcaagtgtggagtcgtcaatggaattcaccagttcgctgactgtgtcgtctcatctc
ccgccaccacgtacacggattttcaagatcatagtgattggggactccggggtgggcaag
acctgcctcacctaccgattctgtgctggcaagtttccggagaaaaccgaggccactatc
ggggtggactttcgggagaaacttatcgaaattgacggagagacaatcaaggtccagcta
tgggacacggcgggccaggagcgctttcgtaagagcatggtacagcactactaccgcaat
gtgcacgctgtggtgtttgtgtacgacgtaaccagcgccgccagcttccgcagcctcccg
acctggatcgaggagtgtaagcagcacgccctgggccaggaggtcccgaggatcctggtg
gggaacaagtgtgacctgcagaactctgtccaggtgggcacggacttggcccagcagttt
gcagacgcccactctatgcccctgttcgagacatctgccaagaaccccagcagtgacggt
agcggagacagtatccgggggagcagtgatcacgtggaggccatcttcatgacggtggcc
cacaagctgaagtcccagaagcctctgatacttagccagctgcccaggggggtgttagcg
ggggacacggtaaccctgataagggggagggacgagggcgaggagaaggtgagctggacc
tgcagctgctga

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