Oncorhynchus keta (chum salmon): 118377935
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Entry
118377935 CDS
T09424
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03420
Nucleotide excision repair
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118377935
09124 Replication and repair
03420 Nucleotide excision repair
118377935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oke03051
]
118377935
03400 DNA repair and recombination proteins [BR:
oke03400
]
118377935
Proteasome [BR:
oke03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118377935
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118377935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
118377935
NCBI-ProteinID:
XP_035620756
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All DBs
Position
32:27593567..27602266
Genome browser
AA seq
353 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATAASTPSSEGPKAPVQDSGSSAGPAPAAIPIPPEEPTPTV
AEPPAPASSDPCMEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNPHR
AVEYLLTGIPSSPVQETNPPAQLPASARTGTETPTVAEGENPLEFLRSQPQFQSMRQVIQ
QNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAAVEEGAP
VNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgttaaagacactgcaacagcagaccattcaaatcgacatagacccagaa
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacaaaagctcatatatgctggcaaaatcctgcaagatgacacgcctattaaa
gactacaaaattgatgaaaagaattttgttgtcgttatggtatcgaaggcaaagtctgcc
acagctgcatcaacaccttcctcggagggacccaaggcccctgtccaagactctgggtcg
tctgcgggcccggcccctgcagccatccctatccccccagaggagcccacacctacagtc
gcagagcccccagctccagccagctccgacccctgtatggaggttcaggggggagatgcc
tcctctgccttggtgacaggagcggagtatgagaccatgctgacagagataatgtctatg
ggttatgagagggagagagtggtagctgctctccgggccagcttcaacaacccccatcgg
gctgtggagtacctcctcactggcattcctagcagtccggtccaagagactaatccccca
gcacagcttcctgcatctgcccgcacaggcacagagacccctactgtagctgagggagaa
aaccctctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtgatccag
cagaacccctcactgctgccagctctgctccaacagctgggtcgggagaacccacagctc
ctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccggcgggg
gaggttggagacgtgcctgaggtgggggacctgggggctgcagtggaggagggagctcca
gtcaactacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagcgttg
ggtttccccgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgagaaccta
gctgccaacttcctcctgaaccagggctttgaggatgaatga
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