Oncorhynchus keta (chum salmon): 118378032
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Entry
118378032 CDS
T09424
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118378032 (npas4l)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118378032 (npas4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
118378032
NCBI-ProteinID:
XP_052365870
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MTVCCELCESPWSSERCSFHLFSGETESRLGLCKRFRSTKGASKARRDQINSEIRNMRTL
LPIPQEDQDRLSYLHSMAVITAYIRKSFLYKGLSADQSRLSSSSSYPLYETFLPAVHGFI
LILSSRGRLVYVSENVSDYLGLSMVDVLQGDTFYDLVESQDVETVRSNLETDNTTSTAER
SFVCQMHTSKAFRQEYGNCCSIMVRGRYQTIPQSPQSTPTSSPDRGRSGSPVEMVFLALC
TPTVNHLGNSIFSSCSSSFTSLHRPDMSFSHLDESVVFYLGYSSEELIGRSWYSLLHPED
LSLSAYSHKSLMQADEGRQMEMVLRLQHSDLSWSWIYTRAAKLPGNQEVSCCNYIISETE
AMYLRKNIHSDAFRASPPQPYCPSPTPQLTQSCCPTRDLKRQREFSQCSSISETENRSKT
SRRQRAESNAVFYMTSCSSSSQASPVAAFSTPPYSPTSSHYNSSLSPAQQDDTSSDSLLD
VFGYTENLTYYYHCPEGGTEVGSGPSCLLSPSRSFQPGSEQSFHQSIFSQTDAFSPQSCP
SSPQHDCPACPADARLVPDCLSVSDLLESSADCPITIHTEDYSLSIQPQGDATSPYSLSV
QPQGGATSPYSLSVQPLGDATSPYSLSVQPLGGATSPYSLSVQPQGDATSPYSLSVQPQG
DATSPYSLSVQPLGDATSPYSLSVQPQGGATSPYSLSVQPQGGATRTYQSHHIPQTVAPP
IGGLLTPNPSPTSDLSFLYSDRDKVEISILAQQISSLASSFDLFNTLSPIQTPRQPSSEP
LPWAQLPGHSPVPLRIKPELVLDKGVFDSLLKDLSMVQGPGSLSHCYQPQDPSTLALSSL
VDPLSMQQSSRSLSLPLQHPSSLSLSLPMQHPSSLSLSLPLQHPSSLSLSLPMQHPSSLS
LSLPLQHPSSLSLSLPLDPFHPNLDPFSLRTSCHNQTSELHQLNLPHSLHQDGLVEESMY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgacggtttgttgtgagttgtgtgaaagtccatggagcagtgagcgctgctcctttcat
ctgttcagcggggagacagaaagccgcctgggactctgcaagagattcaggtctacgaag
ggagcgtctaaagccaggagggaccagatcaactctgagatcaggaacatgagaactctg
ctccccatccctcaggaggaccaggacagactgtcatacctccacagcatggcagttatc
acagcatacatcaggaagagctttctgtataagggattatcagctgatcagagtcgtctc
tcctcttcctcctcctatcctctgtacgagaccttcctcccagccgtgcatggtttcatt
ctgatcctctcctcccggggcaggctggtctacgtctctgagaacgtctctgattacctg
gggctctccatggttgatgttcttcagggagacacattctatgacctggtggagagtcag
gatgtggagacagttagatctaacctggagacagacaacacaacgtcaactgcagagagg
agttttgtgtgtcagatgcacacctccaaggccttcagacaagagtacggtaactgctgt
tctataatggtccgaggacgctaccagaccatcccacaatccccccagtccacccccaca
tcctccccagaccgtggccgatctggctcccctgtggagatggtgttcttggctctctgc
acacccacagtgaaccacctgggcaacagcatcttctcctcctgctcctcctccttcacc
agcctccatagaccagacatgagcttcagtcacctggacgaaagtgttgtgttttacttg
ggctactcatcggaggagctgattggtcgatcgtggtacagcctcctccaccctgaagac
ctctccttgagtgcctactcacataagagtctgatgcaggcagacgagggtaggcagatg
gagatggttctgaggctccaacacagcgacctctcatggtcctggatctacactagagcc
gctaagcttcctgggaaccaggaagtgagctgctgtaactacattatcagtgaaacagaa
gccatgtatctgaggaaaaacatccacagcgatgctttcagagcctctcctcctcagccc
tactgcccctctcccaccccccagctgacccagagctgttgccccaccagggacctaaag
agacagagagaattcagccagtgcagtagtatatctgagactgagaacaggtctaagacc
agtaggagacagagagcagagtctaatgctgtgttctacatgacatcatgtagctcctcc
tctcaggcctcacctgtcgccgccttctccacccctccctacagccccacctcctcccac
tacaactcctccctctctccagcacagcaggacgacaccagctctgactctctgttggat
gtgtttggctacacagagaacttaacctactactaccattgccctgagggagggactgag
gtagggagtgggccttcttgcctcctctccccctctaggtccttccagcccggctcggag
cagtccttccaccagagtatcttcagccagactgacgcattctctcctcagtcctgccct
tcttctccccagcatgattgcccagcatgccctgctgatgcccggctggtccctgactgt
ctatctgtatcagacctgttagagagttcagcagactgccccatcaccatccatactgaa
gactacagcctctcgattcagccacaaggtgatgccaccagtccatacagcctctcggtt
cagccacaaggtggtgccaccagtccatacagcctctcggttcagcctctaggtgatgcc
accagtccatatagcctctcggttcagcctctaggtggtgccaccagtccatacagcctc
tcggttcagccacaaggtgatgccaccagtccatacagcctctcggttcagcctcaaggt
gatgccaccagtccatacagcctctcggttcagcctctaggtgatgccaccagtccatac
agcctctcggttcagccacaagggggtgccaccagtccatacagcctctcggttcagcca
caaggtggtgccaccaggacataccagagccaccatatacctcagactgtcgctcctcct
attggaggcctgctgacccctaacccctccccgacctccgacctctccttcctctacagt
gacagagacaaggtagagatcagtatcctagcccagcagatctcctctctggcctccagc
ttcgacctgttcaacaccctgagccccatccagaccccacgtcagccgagctcagaaccc
cttccctgggcacagctcccaggtcactcccctgtccccctccgcatcaagccagagctg
gtcctggataagggagtgtttgatagtctcctgaaggatctgagcatggttcagggacct
gggagtctgtctcactgctaccaacctcaggacccttccaccctggctttgtcttctcta
gtggaccctctatccatgcagcagtcatcccgctctctctccctccccctgcaacacccc
tcatccctctctctctccctccccatgcaacacccctcatccctctctctctccctcccc
ctgcaacacccctcatccctctctctctccctccccatgcaacacccctcatccctctct
ctctccctccccctgcaacacccctcatccctctctctctccctccccctggacccattt
caccctaacctggatcccttctctctgaggacaagctgtcataatcagacctctgagttg
catcaactcaacctgccccacagtctccatcaagatgggcttgttgaagaatccatgtac
tga
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