KEGG   Oncorhynchus keta (chum salmon): 118378036
Entry
118378036         CDS       T09424                                 
Name
(RefSeq) protocadherin-10 isoform X1
  KO
K16499  protocadherin delta 2
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oke04515]
    118378036
Cell adhesion molecules [BR:oke04515]
 Cadherins
  Protocadherins
   118378036
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 118378036
NCBI-ProteinID: XP_035620866
EnsemblRapid: ENSOKEG00005008234
LinkDB
Position
4:complement(53410805..53428213)
AA seq 1014 aa
MIVLFLLLCIADGVVSQIRYSVPEEAGHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFINEKIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKSLDREQQASHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NTPAGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVRSEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKIMDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVARDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELFSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIIAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSAGTDLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGDKSFSTFGK
ETPLSHHHQNHLHLSHHHATHANQAKLERKAFEALLSSTRAPYKPAYLTRKGVC
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgattgtgctattccttttgctgtgtatcgcggatggagtggtctctcagatacgctac
tctgtgccggaggaggctggacacggcacgttcgtagggaatatcgccgaggacctggga
ctggacatgaccaaaatcgcttcacgccgcttccaggttgtgcccagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcatcaacgagaaaattgaccgggag
cagatctgcaagcagagtgccagctgtcttttacaccttgaagtatttttggagaaccca
ctcgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgaaaccgacatcaccgtagagatctcggagagcgcagtccccggtacccggtttccc
ctagagagcgcattcgatccggacgtgggttccaatgcgctgcgcacatacgacatcacc
accaataactacttctacttggatgtgcagacgcagaccgacgggaacaaattcgcagaa
ctggtgctcgagaagtcactggacagggagcagcaggcgtcccacaggtatgtgctgact
gcagtggacgggggccagccgccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccagtgtactcagtgagtcttcaggag
aacacaccggcggggaccctcgttatccagctgaacgccacggacttagacgagggtcag
aatggggagatagtgtattcattcagtaaccacatctccagccgcgtcaaggacctgttc
gccatagacgcgcgcactggacgcatcgaggtgcgcagtgaggtggattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatctcggacccaatgccgtggccgcgcac
tgtaaagttctcgtgaaaataatggacgtaaatgataatgctcctgatatcacattcagc
acagtgaccgagtcggtgagtgaaagggcagccccgggcaccgttatagccctactgagc
gtgactgacaaagatgctgaggaaaacggaaagattcacgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagatggaccccta
aatagagagaatgctgactcttattcagtgactgtagttgccagggatacagggacccct
tcccttgccaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtgtatgtgactgaaaacaatgtgccaggtgcttat
atccacgctgtgaccgctctggacccagatgttggacagaacgctctcattagttactcc
ataatggagtgcgatattcagggtatgtctgtgaaaacatatgtgtcaatcaacgaagag
acgggctacctttacgcactcagatcattcgattacgagcagttaaaagacttcactttc
atggttcaggcgaaagatgcaggtagccctgagctcttctcgaacgccacggtcaaagta
atcatcgtggaccagaatgacaaccctccctccgttattgctcctcttggtaaaaatggc
accgctagagagcctctgccccgctccgccgagcctggctacctggtaacccgtatcatc
gccatggatgcagacgacggagagaacgcacggctctcctacagcatccagcgggggaac
gagaacggcatgttccgcatggactggaggacaggagaattgcgtactgcccggcgcgtc
tccaccaagcgggacccaaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagtgtggtggag
gaccatcgggagaggggcaccgccaagtccaaggagacctcgctggacctcaccctcatc
ctcatcatcgccctgggctcagtctccttcatcttcctcctggctatgatcgtgctggcc
gtgcgctgccagaaggacaaaaagctcaacatctacacgtgcctcactagtgattgctgc
ctcgggtgcgcaacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tccgatataatgctggtgcagagcgccaacgtcaccggggccggtacagctcaggtgcca
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgactccggagtcggccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacaccagcgagcc
gagctcagttacctggtggacagacctcggcgtgtgaatagttcggctttccaagaagcg
gatctcgtaagctctaaagacagtggtcatggtgacagcgagcaaggcgacagtgaccat
gacgccaccaatcgaggtcactctgccggcactgatctcttctctaactgcacggaggag
tgcaaggcactgggacactccgaccgctgttggatgccctcctttgtgccctccgacggg
cgccaggcagcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagccaagagcaaacgggcgataagtcattctccacctttggcaaa
gagacccccctcagccaccaccaccaaaaccacctccacctcagccaccaccatgccacc
cacgccaaccaagccaagttagagaggaaagcgtttgaggcacttctgtctagcacgcga
gcgccttacaaacctgcctatttgacgaggaaaggggtttgctag

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