Oncorhynchus keta (chum salmon): 118378036
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Entry
118378036 CDS
T09424
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118378036
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118378036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
118378036
NCBI-ProteinID:
XP_035620866
EnsemblRapid:
ENSOKEG00005008234
LinkDB
All DBs
Position
4:complement(53410805..53428213)
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AA seq
1014 aa
AA seq
DB search
MIVLFLLLCIADGVVSQIRYSVPEEAGHGTFVGNIAEDLGLDMTKIASRRFQVVPSSRTP
YLEVNMENGILFINEKIDREQICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESAVPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKSLDREQQASHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYSVSLQE
NTPAGTLVIQLNATDLDEGQNGEIVYSFSNHISSRVKDLFAIDARTGRIEVRSEVDFEES
SLYQIFVQAKDLGPNAVAAHCKVLVKIMDVNDNAPDITFSTVTESVSERAAPGTVIALLS
VTDKDAEENGKIHVEILGDVPFKLKPSFRNYFTIVTDGPLNRENADSYSVTVVARDTGTP
SLATSKSIKVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDVGQNALISYS
IMECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGSPELFSNATVKV
IIVDQNDNPPSVIAPLGKNGTAREPLPRSAEPGYLVTRIIAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSTKRDPNQMYDLLIEVRDHGQPPLSSTASVFVVLVDSVVE
DHRERGTAKSKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCLTSDCC
LGCATCCSRHARARKKKLSKSDIMLVQSANVTGAGTAQVPVEESGSFGSHHQNQNYCYQV
CLTPESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRA
ELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSAGTDLFSNCTEE
CKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFESQEQTGDKSFSTFGK
ETPLSHHHQNHLHLSHHHATHANQAKLERKAFEALLSSTRAPYKPAYLTRKGVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattccttttgctgtgtatcgcggatggagtggtctctcagatacgctac
tctgtgccggaggaggctggacacggcacgttcgtagggaatatcgccgaggacctggga
ctggacatgaccaaaatcgcttcacgccgcttccaggttgtgcccagctcgcggacgccg
tacctggaagtgaacatggagaacgggattctgttcatcaacgagaaaattgaccgggag
cagatctgcaagcagagtgccagctgtcttttacaccttgaagtatttttggagaaccca
ctcgagctgttccgcgtggagatagaggtcgtggatatcaatgacaatccgcccagcttc
cccgaaaccgacatcaccgtagagatctcggagagcgcagtccccggtacccggtttccc
ctagagagcgcattcgatccggacgtgggttccaatgcgctgcgcacatacgacatcacc
accaataactacttctacttggatgtgcagacgcagaccgacgggaacaaattcgcagaa
ctggtgctcgagaagtcactggacagggagcagcaggcgtcccacaggtatgtgctgact
gcagtggacgggggccagccgccacggacaggcactgctctgctggtggtcaaagtgctg
gattctaacgacaacgtgcccgtgtttgaccagccagtgtactcagtgagtcttcaggag
aacacaccggcggggaccctcgttatccagctgaacgccacggacttagacgagggtcag
aatggggagatagtgtattcattcagtaaccacatctccagccgcgtcaaggacctgttc
gccatagacgcgcgcactggacgcatcgaggtgcgcagtgaggtggattttgaggagagc
agtttatatcaaatattcgttcaggcgaaagatctcggacccaatgccgtggccgcgcac
tgtaaagttctcgtgaaaataatggacgtaaatgataatgctcctgatatcacattcagc
acagtgaccgagtcggtgagtgaaagggcagccccgggcaccgttatagccctactgagc
gtgactgacaaagatgctgaggaaaacggaaagattcacgttgaaatcctcggtgacgtc
ccgttcaaactcaaaccctcctttaggaactatttcaccattgtaacagatggaccccta
aatagagagaatgctgactcttattcagtgactgtagttgccagggatacagggacccct
tcccttgccaccagtaaatcaatcaaagtgcaagtgtcggatgaaaatgacaatgcgcca
acgtttacgcagcccatatatgatgtgtatgtgactgaaaacaatgtgccaggtgcttat
atccacgctgtgaccgctctggacccagatgttggacagaacgctctcattagttactcc
ataatggagtgcgatattcagggtatgtctgtgaaaacatatgtgtcaatcaacgaagag
acgggctacctttacgcactcagatcattcgattacgagcagttaaaagacttcactttc
atggttcaggcgaaagatgcaggtagccctgagctcttctcgaacgccacggtcaaagta
atcatcgtggaccagaatgacaaccctccctccgttattgctcctcttggtaaaaatggc
accgctagagagcctctgccccgctccgccgagcctggctacctggtaacccgtatcatc
gccatggatgcagacgacggagagaacgcacggctctcctacagcatccagcgggggaac
gagaacggcatgttccgcatggactggaggacaggagaattgcgtactgcccggcgcgtc
tccaccaagcgggacccaaaccagatgtatgacctgttgatagaggtgagggaccacggc
cagccacccctctcctccaccgccagtgtgttcgtggtgctggtggacagtgtggtggag
gaccatcgggagaggggcaccgccaagtccaaggagacctcgctggacctcaccctcatc
ctcatcatcgccctgggctcagtctccttcatcttcctcctggctatgatcgtgctggcc
gtgcgctgccagaaggacaaaaagctcaacatctacacgtgcctcactagtgattgctgc
ctcgggtgcgcaacatgctgcagcaggcatgcgcgagcccgcaagaaaaagctcagcaag
tccgatataatgctggtgcagagcgccaacgtcaccggggccggtacagctcaggtgcca
gtggaagagtccgggagcttcggctctcaccaccaaaaccagaactattgctaccaggta
tgtctgactccggagtcggccaaaaccgacctcatgttcctaaagccgtgtagcccatct
aggagcacagacacggaacacaacccgtgcggggccatagtgacagggtacactgaccag
cagcctgacatcatatcaaacggcagcattttatcaagcgagaccaaacaccagcgagcc
gagctcagttacctggtggacagacctcggcgtgtgaatagttcggctttccaagaagcg
gatctcgtaagctctaaagacagtggtcatggtgacagcgagcaaggcgacagtgaccat
gacgccaccaatcgaggtcactctgccggcactgatctcttctctaactgcacggaggag
tgcaaggcactgggacactccgaccgctgttggatgccctcctttgtgccctccgacggg
cgccaggcagcagactaccgcagcaacctgcacgtgccaggcatggactccgtgcccgac
actgaggtatttgaaagccaagagcaaacgggcgataagtcattctccacctttggcaaa
gagacccccctcagccaccaccaccaaaaccacctccacctcagccaccaccatgccacc
cacgccaaccaagccaagttagagaggaaagcgtttgaggcacttctgtctagcacgcga
gcgccttacaaacctgcctatttgacgaggaaaggggtttgctag
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